RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 P3H2Q8IVL5 708 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 C1orf131Q8NDD1 294 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 MAML3Q96JK9 1138 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MYOZ2Q9NPC6 264 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MYH15Q9Y2K3 1946 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 GRAP2O75791 330 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CTDNEP1O95476 244 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 SERPIND1P05546 499 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MAD2L1Q13257 205 aaPredicted RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 ZNF177Q13360 481 aaPredicted RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 CRYMQ14894 314 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 PHKG1Q16816 387 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MROH9Q5TGP6 573 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ADCK2Q7Z695 626 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 SLFN11Q7Z7L1 901 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 DDX42Q86XP3 938 aaKnown RBP eCLIP4.72□□□□□ -1.65
CHD9-221ENST00000615216 ENGASEQ8NFI3 743 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 GMCL1Q96IK5 515 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 TSEN34Q9BSV6 310 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 CELF4Q9BZC1 486 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 CNOT7Q9UIV1 285 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 SHOC2Q9UQ13 582 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 F8VZ95 297 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 RNF103O00237 685 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 GPR182O15218 404 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 KPNA6O60684 536 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 FKBP6O75344 327 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CYP2C9P11712 490 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CAPZA2P47755 286 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 GTF2A2P52657 109 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 FBXL16Q8N461 479 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 USP33Q8TEY7 942 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ZFRQ96KR1 1074 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 COLEC11Q9BWP8 271 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 NAGPAQ9UK23 515 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 USP18Q9UMW8 372 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 AP3M1Q9Y2T2 418 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 PPP2R3BQ9Y5P8 575 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 NPM3O75607 178 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 ITGB3P05106 788 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 LHX1P48742 406 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 PRIM2P49643 509 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 TMED10P49755 219 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 CYP24A1Q07973 514 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 LRRC74AQ0VAA2 488 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 TDRD5Q8NAT2 981 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 VPS33AQ96AX1 596 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 TUBGCP3Q96CW5 907 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 THAP2Q9H0W7 228 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 DCLRE1BQ9H816 532 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 SYBUQ9NX95 663 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 RIMBP3CA6NJZ7 1639 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 RIMBP3BA6NNM3 1639 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 RIMBP3Q9UFD9 1639 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 OGTO15294 1046 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 STAG3L1P0CL83 205 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 TCF3P15923 654 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 OOSP2Q86WS3 158 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CYP4Z2PQ8N1L4 340 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 UBXN6Q9BZV1 441 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MMADHCQ9H3L0 296 aaPredicted RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 STN1Q9H668 368 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 FAM153AQ9UHL3 310 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 SPATA31A1Q5TZJ5 1347 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 NKRFO15226 690 aaKnown RBP eCLIP4.72□□□□□ -1.651e-6■■□□□ 11.6
CHD9-221ENST00000615216 GHRP10912 638 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ZNF135P52742 658 aaPredicted RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 RAB14P61106 215 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CHRNB3Q05901 458 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 SMAD1Q15797 465 aaKnown RBP4.72□□□□□ -1.65
CHD9-221ENST00000615216 CYB5D1Q6P9G0 228 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ADGRF2Q8IZF7 708 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MYO1HQ8N1T3 1032 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 MYCBPAPQ8TBZ2 947 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CASP10Q92851 521 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 COMMD8Q9NX08 183 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 RPS6KL1Q9Y6S9 549 aa4.72□□□□□ -1.65
CHD9-221ENST00000615216 ALDH1A2O94788 518 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 OXCT1P55809 520 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 TRIM16LQ309B1 348 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 GRTP1Q5TC63 336 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 PRR5LQ6MZQ0 368 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 PPP4R4Q6NUP7 873 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 ZFP1Q6P2D0 407 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 LINC00116Q8NCU8 138 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 DDHD1Q8NEL9 900 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 EPS8L3Q8TE67 593 aaKnown RBP4.71□□□□□ -1.65
CHD9-221ENST00000615216 OSCP1Q8WVF1 389 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 MAGED4Q96JG8 741 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 FAM111AQ96PZ2 611 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 PCDH9Q9HC56 1237 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 USE1Q9NZ43 259 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 SLIT3O75094 1523 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 hCG_2014768A0A024R1R8 64 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 ZNF839A8K0R7 811 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 ANKRD65E5RJM6 399 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 LRG1P02750 347 aa4.71□□□□□ -1.65
CHD9-221ENST00000615216 SUPT20HL2P0C7V6 817 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms