RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ACER1Q8TDN7 264 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 SNX13Q9Y5W8 968 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 SDR42E2A6NKP2 422 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 M0R2N6 131 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 WDR46O15213 610 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 PGM3O95394 542 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 MMP10P09238 476 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 HADHBP55084 474 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 RPS6P62753 249 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 SLC25A3Q00325 362 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 GALNT15Q8N3T1 639 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 RFWD2Q8NHY2 731 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 TAAR1Q96RJ0 339 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 PRPF18Q99633 342 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 HSD17B14Q9BPX1 270 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 CISHQ9NSE2 258 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 ZNF189O75820 626 aaPredicted RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 APOA4P06727 396 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ETS2P15036 469 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 STAT5BP51692 787 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SPP2Q13103 211 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 LAYNQ6UX15 382 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 STKLD1Q8NE28 680 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 CCDC28BQ9BUN5 200 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ADRB2P07550 413 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 KCNA4P22459 653 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ADORA2BP29275 332 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PMLP29590 882 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 RHBDL3P58872 404 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PDK2Q15119 407 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PDK3Q15120 406 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ZNF483Q8TF39 744 aaPredicted RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 C10orf88Q9H8K7 445 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SIX2Q9NPC8 291 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 GID8Q9NWU2 228 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SLC39A10Q9ULF5 831 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PSMD10O75832 226 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 FDFT1P37268 417 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 RPL5P46777 297 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 NUP107P57740 925 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PDAP1Q13442 181 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 LRRC38Q5VT99 294 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PIWIL2Q8TC59 973 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 CNDP1Q96KN2 507 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 PHACTR1Q9C0D0 580 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ADNPQ9H2P0 1102 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 TCF7L2Q9NQB0 619 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 CSADQ9Y600 493 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 BANF1O75531 89 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 NME3Q13232 169 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 DPYSL3Q14195 570 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 HABP4Q5JVS0 413 aaKnown RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 ZFP1Q6P2D0 407 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 GADL1Q6ZQY3 521 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 LPAR1Q92633 364 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 GRIP2Q9C0E4 1043 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 MTMR12Q9C0I1 747 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
VPS36-207ENST00000611132 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
VPS36-207ENST00000611132 DCXO43602 365 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 FOXN2P32314 431 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 MYLK4Q86YV6 388 aaPredicted RBP15.14■□□□□ 0.01
VPS36-207ENST00000611132 MAP4K3Q8IVH8 894 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 SLC17A7Q9P2U7 560 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 SAE1Q9UBE0 346 aaPredicted RBP15.14■□□□□ 0.01
VPS36-207ENST00000611132 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 DDTLA6NHG4 134 aaPredicted RBP15.14■□□□□ 0.01
VPS36-207ENST00000611132 TBC1D12O60347 775 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 S100BP04271 92 aaPredicted RBP15.14■□□□□ 0.01
VPS36-207ENST00000611132 LCP1P13796 627 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 NCKAP1LP55160 1127 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 PTK2BQ14289 1009 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 NFIL3Q16649 462 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 CYP1B1Q16678 543 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 AAGABQ6PD74 315 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 IFNEQ86WN2 208 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 ATXN10Q9UBB4 475 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 ANGPTL3Q9Y5C1 460 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS36-207ENST00000611132 ICAM1P05362 532 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 ITGAVP06756 1048 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 LYNP07948 512 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 TSHRP16473 764 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 TAS2R40P59535 323 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 PDK1Q15118 436 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 DDIASQ8IXT1 998 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
VPS36-207ENST00000611132 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
VPS36-207ENST00000611132 TRPC5OSA6NMA1 111 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms