RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ADGRG2Q8IZP9 1017 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 CNOT6LQ96LI5 555 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 ELOVL4Q9GZR5 314 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 MMP17Q9ULZ9 603 aa18.65■□□□□ 0.58
SHKBP1-203ENST00000594298 KMT2BQ9UMN6 2715 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 SLC9A3R1O14745 358 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 CAVIN2O95810 425 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 CYP17A1P05093 508 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 KCNA4P22459 653 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 EIF2DP41214 584 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 MRPS21P82921 87 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 CREB5Q02930 508 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 USP39Q53GS9 565 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 TDRD10Q5VZ19 366 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 PMS2CLQ68D20 193 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 RNF43Q68DV7 783 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 TCEAL6Q6IPX3 200 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 FILIP1Q7Z7B0 1213 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 OR6B3Q8NGW1 331 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 TCEAL3Q969E4 200 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 CCDC127Q96BQ5 260 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 TSG101Q99816 390 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 CPQQ9Y646 472 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 ACACBO00763 2458 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 EPG5Q9HCE0 2579 aa18.64■□□□□ 0.57
SHKBP1-203ENST00000594298 TPRP12270 2363 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 ZNF638Q14966 1978 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 RALGAPA1Q6GYQ0 2036 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 GOLGA6L22H0YM25 854 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 MAPK13O15264 365 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 PTPN1P18031 435 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 NR2F2P24468 414 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 GBP1P32455 592 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 CACNA2D1P54289 1103 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 SEC13P55735 322 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 TNNC1P63316 161 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 TAF10Q12962 218 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 DHCR24Q15392 516 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 CRY1Q16526 586 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 EDRF1Q3B7T1 1238 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 WDR72Q3MJ13 1102 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 HSF5Q4G112 596 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 C2orf27AQ580R0 203 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 DDX42Q86XP3 938 aaKnown RBP eCLIP18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 SLITRK1Q96PX8 696 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 EDEM2Q9BV94 578 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 TMEM30AQ9NV96 361 aa18.63■□□□□ 0.57
SHKBP1-203ENST00000594298 A0A0A0MRY4 1105 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 KCNK5O95279 499 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 ATICP31939 592 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 PRCPP42785 496 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 ADAM9Q13443 819 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 SMYD4Q8IYR2 804 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 B3GALNT2Q8NCR0 500 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 MDGA1Q8NFP4 955 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 OVCA2Q8WZ82 227 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 ERCC4Q92889 916 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 GZF1Q9H116 711 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 XYLT2Q9H1B5 865 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 DPEP3Q9H4B8 488 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 ANAPC1Q9H1A4 1944 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 EML5Q05BV3 1969 aa18.62■□□□□ 0.57
SHKBP1-203ENST00000594298 KIAA1549LQ6ZVL6 1849 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PSMA7O14818 248 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 CETN3O15182 167 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PHACTR2O75167 634 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 KRT13P13646 458 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 TRPC3Q13507 836 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 ANO7Q6IWH7 933 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 RHBDF2Q6PJF5 856 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 NUP93Q8N1F7 819 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PDZD8Q8NEN9 1154 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 OLIG1Q8TAK6 271 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 TMC2Q8TDI7 906 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PARD3BQ8TEW8 1205 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 ZNF516Q92618 1163 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 SYAP1Q96A49 352 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 DHTKD1Q96HY7 919 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 PNKPQ96T60 521 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 B3GNT5Q9BYG0 378 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 TPSD1Q9BZJ3 242 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 VRTNQ9H8Y1 702 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 SMPD4Q9NXE4 827 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 CFAP97Q9P2B7 532 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 TBC1D14Q9P2M4 693 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 CACNA1BQ00975 2339 aa18.61■□□□□ 0.57
SHKBP1-203ENST00000594298 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 LNP1A1A4G5 178 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ANTXRLA6NF34 631 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 A8MXQ7 604 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ALDH1A2O94788 518 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 RTN3O95197 1032 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ADH1CP00326 375 aa18.6■□□□□ 0.57
SHKBP1-203ENST00000594298 ABL1P00519 1130 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms