RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
DNMT1-229ENST00000593049 GMIPQ9P107 970 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 TMEM63CQ9P1W3 806 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 APEX2Q9UBZ4 518 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 CHORDC1Q9UHD1 332 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-229ENST00000593049 TSPAN16Q9UKR8 245 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 CNTN6Q9UQ52 1028 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 CCL26Q9Y258 94 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 SIT1Q9Y3P8 196 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 ZNF318Q5VUA4 2279 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 MYO16Q9Y6X6 1858 aa17.33■□□□□ 0.36
DNMT1-229ENST00000593049 ZDBF2Q9HCK1 2354 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 XPO1O14980 1071 aaKnown RBP17.32■□□□□ 0.36
DNMT1-229ENST00000593049 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-229ENST00000593049 SETSIPP0DME0 302 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 PON1P27169 355 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 MAGEA9P43362 315 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-229ENST00000593049 MYL5Q02045 173 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 MTF1Q14872 753 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 ZNF77Q15935 545 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 CNGA2Q16280 664 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 GOLGA7BQ2TAP0 167 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 LCLAT1Q6UWP7 414 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 ANKRD20A12PQ8NF67 263 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 PJA1Q8NG27 643 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 KAT5Q92993 513 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 KREMEN1Q96MU8 473 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
DNMT1-229ENST00000593049 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 COL4A2P08572 1712 aa17.32■□□□□ 0.36
DNMT1-229ENST00000593049 O00370 1275 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 PES1O00541 588 aaKnown RBP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 MED7O43513 233 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 MBL2P11226 248 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 KRT5P13647 590 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 SLC9A1P19634 815 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 ZNF132P52740 706 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 AMPD2Q01433 879 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 TYRO3Q06418 890 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 UBXN2BQ14CS0 331 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 HSP90AA4PQ58FG1 418 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 RALGPS2Q86X27 583 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 OSCP1Q8WVF1 389 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 EXOC4Q96A65 974 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 FAM83CQ9BQN1 747 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 NACA2Q9H009 215 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 LTB4R2Q9NPC1 389 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
DNMT1-229ENST00000593049 USP3Q9Y6I4 520 aa17.31■□□□□ 0.36
DNMT1-229ENST00000593049 MIA3Q5JRA6 1907 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 LEFTY2O00292 366 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 SLC9A3R1O14745 358 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-229ENST00000593049 PLA2G4AP47712 749 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 IFNAR2P48551 515 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 RUNX3Q13761 415 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 MEA1Q16626 185 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 RAB41Q5JT25 222 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 IER5LQ5T953 404 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 KLHDC10Q6PID8 442 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 C11orf57Q6ZUT1 292 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-229ENST00000593049 PIGZQ86VD9 579 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 TTC30AQ86WT1 665 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 ZNF276Q8N554 614 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 FAM3CQ92520 227 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 ATP2A3Q93084 1043 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 ZFYVE19Q96K21 471 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 LRRC4Q9HBW1 653 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 CYLDQ9NQC7 956 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
DNMT1-229ENST00000593049 CPQQ9Y646 472 aa17.3■□□□□ 0.36
DNMT1-229ENST00000593049 FAM170BA6NMN3 283 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-229ENST00000593049 CYP26A1O43174 497 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 COCHO43405 550 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
DNMT1-229ENST00000593049 TLR5O60602 858 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 RALAP11233 206 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 PDE4CQ08493 712 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 GOLGA8FQ08AF8 430 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 GOLGA8DPQ0D2H9 430 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 NR1H3Q13133 447 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 CPA6Q8N4T0 437 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 KCTD13Q8WZ19 329 aa17.29■□□□□ 0.36
DNMT1-229ENST00000593049 FOXQ1Q9C009 403 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms