RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
SMAD4-215ENST00000592911 ITGA11Q9UKX5 1188 aa9.31□□□□□ -0.92
SMAD4-215ENST00000592911 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 SGK1O00141 431 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 LEFTY2O00292 366 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 GFRA2O00451 464 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 KIAA0391O15091 583 aaKnown RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 NPC1O15118 1278 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 TRAK2O60296 914 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 KLF8O95600 359 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 LDHAP00338 332 aaKnown RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 TUBP50607 506 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 GAD2Q05329 585 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 COL28A1Q2UY09 1125 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 NAIF1Q69YI7 327 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 ADALQ6DHV7 355 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 DENND5BQ6ZUT9 1274 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 TMPRSS7Q7RTY8 843 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 KCNK18Q7Z418 384 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 LIMS2Q7Z4I7 341 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 NAXDQ8IW45 347 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 PHTF2Q8N3S3 785 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 ALLCQ8N6M5 410 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 ARL14EPQ8N8R7 260 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 PDZD8Q8NEN9 1154 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 SLC22A12Q96S37 553 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 GTPBP2Q9BX10 602 aaKnown RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 PCED1AQ9H1Q7 454 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 ARHGEF4Q9NR80 690 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.3□□□□□ -0.92
SMAD4-215ENST00000592911 TMLHEQ9NVH6 421 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 INVSQ9Y283 1065 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
SMAD4-215ENST00000592911 CKAP5Q14008 2032 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 IGHV1OR15-9A0A0B4J2B8 117 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 TCRBV21S2A2A0A5A6 115 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ZNF840PA6NDX5 716 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ADAM23O75077 832 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 FAM13AO94988 1023 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 CER1O95813 267 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 OAS1P00973 400 aaKnown RBP9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ADH5P11766 374 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 CDK4P11802 303 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 HNRNPLP14866 589 aaKnown RBP eCLIP9.29□□□□□ -0.925e-7■■□□□ 14.3
SMAD4-215ENST00000592911 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ANXA13P27216 316 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 NTSR1P30989 418 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 SEC13P55735 322 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 IRX6P78412 446 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-215ENST00000592911 DDR2Q16832 855 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 BTBD8Q5XKL5 378 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 SDE2Q6IQ49 451 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 SLC39A4Q6P5W5 647 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 DBX2Q6ZNG2 339 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 FILIP1Q7Z7B0 1213 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 BRSK2Q8IWQ3 736 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 CCDC33Q8N5R6 958 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 MYCT1Q8N699 235 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 STKLD1Q8NE28 680 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 ENGASEQ8NFI3 743 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 CADM4Q8NFZ8 388 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 HMGB4Q8WW32 186 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 RLN3Q8WXF3 142 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 DNASE2BQ8WZ79 361 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 C8orf48Q96LL4 319 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 CYP2S1Q96SQ9 504 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 GABRG3Q99928 467 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 LINC00597Q9H2U6 94 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 MAGEC2Q9UBF1 373 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-215ENST00000592911 L1RE1Q9UN81 338 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 EXOC7Q9UPT5 735 aa9.29□□□□□ -0.92
SMAD4-215ENST00000592911 BPTFQ12830 3046 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 A0A1B0GTW7 788 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 C2orf78A6NCI8 922 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 FLRT2O43155 660 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 TBCAO75347 108 aaKnown RBP9.28□□□□□ -0.92
SMAD4-215ENST00000592911 BMP15O95972 392 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 GABRG2P18507 467 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 GARTP22102 1010 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 TOB1P50616 345 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-215ENST00000592911 RBP5P82980 135 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 MYO1EQ12965 1108 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 ALCAMQ13740 583 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 SURF1Q15526 300 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 SNX30Q5VWJ9 437 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 RHBDF2Q6PJF5 856 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 ADGRF2Q8IZF7 708 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 ZNF513Q8N8E2 541 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms