RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NEMP1O14524 444 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MED7O43513 233 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 KRT36O76013 467 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 ACAT1P24752 427 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 KLF1Q13351 362 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 VGLL4Q14135 290 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 KPNB1Q14974 876 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MORF4L2Q15014 288 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CFAP157Q5JU67 520 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MIEF2Q96C03 454 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MOCOSQ96EN8 888 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 TMPRSS4Q9NRS4 437 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 ASNSD1Q9NWL6 643 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MCM8Q9UJA3 840 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 FGFR1P11362 822 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 INSRRP14616 1297 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 KLRC2P26717 231 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 RANBP1P43487 201 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 NXNQ6DKJ4 435 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PHF13Q86YI8 300 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 FAM13CQ8NE31 585 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 USP33Q8TEY7 942 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CLEC4CQ8WTT0 213 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 RNF34Q969K3 372 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 SERAC1Q96JX3 654 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 TCRBV9S1A1TA0A576 114 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CFLARO15519 480 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 OPHN1O60890 802 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 ZCCHC18P0CG32 403 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 DPYSL3Q14195 570 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CA9Q16790 459 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PAN2Q504Q3 1202 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 DSTYKQ6XUX3 929 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 C12orf50Q8NA57 414 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PGBD4Q96DM1 585 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 NTPCRQ9BSD7 190 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CDT1Q9H211 546 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PCDH9Q9HC56 1237 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PRM3Q9NNZ6 103 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CLUHO75153 1309 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 KCNK1O00180 336 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CAPN9O14815 690 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 LYPLA1O75608 230 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PGM1P36871 562 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 RNASEH2BQ5TBB1 312 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 TRMT10BQ6PF06 316 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 PCGF5Q86SE9 256 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 ELOVL4Q9GZR5 314 aa14.22□□□□□ -0.13
NDEL1-204ENST00000578172 SMG5Q9UPR3 1016 aaKnown RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
NDEL1-204ENST00000578172 TBC1D12O60347 775 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 ASMTLO95671 621 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 AMPD1P23109 780 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 EMC10Q5UCC4 262 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 CCHCR1Q8TD31 782 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 ACO2Q99798 780 aaKnown RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 SDCBP2Q9H190 292 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 DHX33Q9H6R0 707 aaKnown RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 DDX56Q9NY93 547 aaKnown RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 STRIP2Q9ULQ0 834 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 MFHAS1Q9Y4C4 1052 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 CXorf49A8MYA2 514 aaPredicted RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 DGKIO75912 1065 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 CCDC130P13994 396 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 TFE3P19532 575 aaPredicted RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 GPD1P21695 349 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 AQP5P55064 265 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 KLHL38Q2WGJ6 581 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 FAM183BPQ6ZVS7 135 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 CTU1Q7Z7A3 348 aaKnown RBP14.21□□□□□ -0.13
NDEL1-204ENST00000578172 MAP7D3Q8IWC1 876 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 C1orf127Q8N9H9 656 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 SPATC1LQ9H0A9 340 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 ST6GALNAC4Q9H4F1 302 aa14.21□□□□□ -0.13
NDEL1-204ENST00000578172 MAFGO15525 162 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 EDF1O60869 148 aaKnown RBP14.21□□□□□ -0.14
NDEL1-204ENST00000578172 GSTA1P08263 222 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 OSBPP22059 807 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 CCND1P24385 295 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 TMEM132DQ14C87 1099 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 MPZL3Q6UWV2 235 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 WDR49Q8IV35 697 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 PYROXD2Q8N2H3 581 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 AFG1LQ8WV93 481 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 PCYT2Q99447 389 aa14.21□□□□□ -0.14
NDEL1-204ENST00000578172 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
NDEL1-204ENST00000578172 PPEF2O14830 753 aa14.2□□□□□ -0.14
NDEL1-204ENST00000578172 SERPINB6P35237 376 aa14.2□□□□□ -0.14
NDEL1-204ENST00000578172 MSX2P35548 267 aaPredicted RBP14.2□□□□□ -0.14
NDEL1-204ENST00000578172 SNRPFP62306 86 aaKnown RBP14.2□□□□□ -0.14
NDEL1-204ENST00000578172 GBE1Q04446 702 aa14.2□□□□□ -0.14
NDEL1-204ENST00000578172 ZNF772Q68DY9 489 aaPredicted RBP14.2□□□□□ -0.14
NDEL1-204ENST00000578172 TMEM176AQ96HP8 235 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms