RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	CORO1B	Q9BR76	489 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	TUT1	Q9H6E5	874 aa	Known RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	KAT6A	Q92794	2004 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	INO80B-WBP1	J3KQ70	363 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	SPOP	O43791	374 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	TBX10	O75333	385 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	PSMG1	O95456	288 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	FTL	P02792	175 aa	Predicted RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CYP11B1	P15538	503 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	GPC5	P78333	572 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	FMO1	Q01740	532 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CAV1	Q03135	178 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	MAP2K5	Q13163	448 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CBX3	Q13185	183 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	BTG3	Q14201	252 aa	Predicted RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	TAF1C	Q15572	869 aa	Predicted RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CNPY1	Q3B7I2	92 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	SGO2	Q562F6	1265 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	ATF7IP2	Q5U623	682 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	IQSEC1	Q6DN90	963 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	SPOPL	Q6IQ16	392 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	MPZL3	Q6UWV2	235 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CLNK	Q7Z7G1	428 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	SAPCD2	Q86UD0	394 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	RIBC1	Q8N443	379 aa	Predicted RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	C1orf54	Q8WWF1	131 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	TCHP	Q9BT92	498 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	INO80B	Q9C086	356 aa	Predicted RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	SYNC	Q9H7C4	482 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	FLRT1	Q9NZU1	646 aa		12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	CPSF3	Q9UKF6	684 aa	Known RBP	12.53	□□□□□ -0.4
SPG7-222	ENST00000569820	C2CD2L	O14523	706 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	UBTFL6	P0CB48	400 aa	Predicted RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	IDO1	P14902	403 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	GRM1	Q13255	1194 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	FYB2	Q5VWT5	728 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	EEF1DP3	Q658K8	133 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	MTDH	Q86UE4	582 aa	Known RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	DTX3L	Q8TDB6	740 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	DDX1	Q92499	740 aa	Known RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	NCSTN	Q92542	709 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	CD101	Q93033	1021 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	NR1H4	Q96RI1	486 aa	Predicted RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	BTBD10	Q9BSF8	475 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	TRAIP	Q9BWF2	469 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	SPATA16	Q9BXB7	569 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	APOBEC3G	Q9HC16	384 aa	Known RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	UBN1	Q9NPG3	1134 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	EURL	Q9NYK6	297 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	STX18	Q9P2W9	335 aa	Known RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	ANAPC5	Q9UJX4	755 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	ITGB1BP2	Q9UKP3	347 aa		12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.52	□□□□□ -0.41
SPG7-222	ENST00000569820	PFDN1	O60925	122 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	ZWINT	O95229	277 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	HOXC6	P09630	235 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	ATF2	P15336	505 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	PHKA2	P46019	1235 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	BPIFB4	P59827	614 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	POU5F1B	Q06416	359 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	NR1H3	Q13133	447 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	TCEAL1	Q15170	157 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	CTC1	Q2NKJ3	1217 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	MARCH8	Q5T0T0	291 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	SCARA3	Q6AZY7	606 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	RGMB	Q6NW40	437 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	WDR49	Q8IV35	697 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	DENND1A	Q8TEH3	1009 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	MAML1	Q92585	1016 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	MCUR1	Q96AQ8	359 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF212	Q9UDV6	495 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820		A0A087WZ62	844 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	PRPF4	O43172	522 aa	Known RBP eCLIP	12.51	□□□□□ -0.41	1e-6	■■□□□ 12.6
SPG7-222	ENST00000569820	GAS8	O95995	478 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	VTN	P04004	478 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	LYN	P07948	512 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	SLC10A3	P09131	477 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	TNFAIP2	Q03169	654 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	PTK6	Q13882	451 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	LLGL1	Q15334	1064 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	TRIP13	Q15645	432 aa	Predicted RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	GRIK4	Q16099	956 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	AMHR2	Q16671	573 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	DGKD	Q16760	1214 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	FAM187B	Q17R55	369 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	WDR44	Q5JSH3	913 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	PRAMEF19	Q5SWL8	479 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	C17orf99	Q6UX52	265 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	ZNF365	Q70YC5	407 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	TRABD2A	Q86V40	505 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	CDR2L	Q86X02	465 aa	Predicted RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	USP6NL	Q92738	828 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	PWWP2A	Q96N64	755 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	CCDC28B	Q9BUN5	200 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	CDT1	Q9H211	546 aa		12.51	□□□□□ -0.41
SPG7-222	ENST00000569820	NPHS2	Q9NP85	383 aa		12.51	□□□□□ -0.41

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