RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 EXOC3O60645 756 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 ADAM23O75077 832 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 AKAP3O75969 853 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 MBL2P11226 248 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 GBP1P32455 592 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 TIE1P35590 1138 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 LIMK1P53667 647 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 KDSRQ06136 332 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 TRPC3Q13507 836 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 KNOP1Q1ED39 458 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 SPOPLQ6IQ16 392 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 ACOT1Q86TX2 421 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 TTC30AQ86WT1 665 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 NUP93Q8N1F7 819 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 PHTF2Q8N3S3 785 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 NAT16Q8N8M0 369 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 IL17RCQ8NAC3 791 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 ZMIZ2Q8NF64 920 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 TSTD1Q8NFU3 115 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 DMAC2Q9NW81 257 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 HCN2Q9UL51 889 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 MMP17Q9ULZ9 603 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 CEP295Q9C0D2 2601 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 AKAP13Q12802 2813 aa12.28□□□□□ -0.44
PRPF40B-212ENST00000551111 ZFHX4Q86UP3 3567 aa12.27□□□□□ -0.44
PRPF40B-212ENST00000551111 PHACTR2O75167 634 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 KLF8O95600 359 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 STAU1O95793 577 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 CAVIN2O95810 425 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 F13A1P00488 732 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 ZSCAN22P10073 491 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 CCDC130P13994 396 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 YWHAQP27348 245 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 KIR2DL1P43626 348 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 CLDN10P78369 228 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 CRY1Q16526 586 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 LY6G5CQ5SRR4 150 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 PMS2CLQ68D20 193 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 RASSF3Q86WH2 238 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 C12orf29Q8N999 325 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 TXNDC5Q8NBS9 432 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 FBXO32Q969P5 355 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 ACDQ96AP0 544 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 PAGE5Q96GU1 130 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 CEP295NLQ96MC4 621 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 SMOQ99835 787 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 KCTD10Q9H3F6 313 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 IL37Q9NZH6 218 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 GMIPQ9P107 970 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 PCDHGA5Q9Y5G8 931 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 UBE4BO95155 1302 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 SPEGQ15772 3267 aa12.27□□□□□ -0.45
PRPF40B-212ENST00000551111 PVALEFA0A1B0GWK0 134 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 LNP1A1A4G5 178 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 C4orf47A7E2U8 309 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 KAT7O95251 611 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 KCNK5O95279 499 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 TBX18O95935 607 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 FAM163BP0C2L3 166 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 PFKLP17858 780 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 PMLP29590 882 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 ATICP31939 592 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 ME1P48163 572 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 SLC5A3P53794 718 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 BIRC3Q13489 604 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 NCOA4Q13772 614 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 RNF43Q68DV7 783 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 GPRIN1Q7Z2K8 1008 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 TMEM25Q86YD3 366 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 BBS7Q8IWZ6 715 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 P2RY11Q96G91 374 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 SLITRK1Q96PX8 696 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 TWNKQ96RR1 684 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 PNKPQ96T60 521 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 MED10Q9BTT4 135 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 LSM14BQ9BX40 385 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 VPS45Q9NRW7 570 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 OSER1Q9NX31 292 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 MBD1Q9UIS9 605 aaPredicted RBP12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 ASPMQ8IZT6 3477 aa12.26□□□□□ -0.45
PRPF40B-212ENST00000551111 WDFY3Q8IZQ1 3526 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 A0A0A0MRY4 1105 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 A0A1B0GVL5 298 aa12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 CDX4O14627 284 aaPredicted RBP12.25□□□□□ -0.45
PRPF40B-212ENST00000551111 GREM1O60565 184 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms