RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 CCHCR1Q8TD31 782 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 PRR11Q96HE9 360 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 MRPL45Q9BRJ2 306 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC12A4Q9UP95 1085 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 MFHAS1Q9Y4C4 1052 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNFX1Q9P2E3 1918 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 DNAJC8O75937 253 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 KDSRQ06136 332 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC10A6Q3KNW5 377 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 TTC7BQ86TV6 843 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 CCDC125Q86Z20 511 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 VPS52Q8N1B4 723 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 PYROXD2Q8N2H3 581 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 SLCO2A1Q92959 643 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 MCUR1Q96AQ8 359 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 C2orf40Q9H1Z8 148 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 TCRBV9S1A1TA0A576 114 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 COPEO14579 308 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 USP12O75317 370 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 ASMTLO95671 621 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC8A1P32418 973 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC25A11Q02978 314 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 MCL1Q07820 350 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 LACTB2Q53H82 288 aaPredicted RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 DENND5BQ6ZUT9 1274 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 CTU1Q7Z7A3 348 aaKnown RBP14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 ERAP1Q9NZ08 941 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 RBPJLQ9UBG7 517 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 RABGEF1Q9UJ41 708 aa14.25□□□□□ -0.13
PRPF40B-209ENST00000548825 CITO14578 2027 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 A6NJR5 290 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 FZD9O00144 591 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 P4HA1P13674 534 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 CLDN10P78369 228 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 GBE1Q04446 702 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 OLIG2Q13516 323 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 HIPK4Q8NE63 616 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 SERAC1Q96JX3 654 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 ALOX15BO15296 676 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 SERPINB3P29508 390 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 PEX19P40855 299 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 GHRHRQ02643 423 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 MBTD1Q05BQ5 628 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 C16orf46Q6P387 395 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 TTC8Q8TAM2 541 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 RSRC1Q96IZ7 334 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 NCAPGQ9BPX3 1015 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 TSSK1BQ9BXA7 367 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 MANSC1Q9H8J5 431 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 TUBGCP4Q9UGJ1 667 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 GGA2Q9UJY4 613 aa14.24□□□□□ -0.13
PRPF40B-209ENST00000548825 FAM237BA0A1B0GVD1 139 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 SRRM3A6NNA2 597 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 HBP1O60381 514 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ATG7O95352 703 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 TRUB2O95900 331 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 LGALS2P05162 132 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 GHRP10912 638 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 PCK1P35558 622 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 AP1B1Q10567 949 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 CDCA5Q96FF9 252 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 CYTH2Q99418 400 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 APOL2Q9BQE5 337 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNF112Q9UJU3 913 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ADAMTS5Q9UNA0 930 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 SHOC2Q9UQ13 582 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 USH1CQ9Y6N9 552 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ZBTB42B2RXF5 422 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNF132P52740 706 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 BNIP1Q12981 228 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 NR1H3Q13133 447 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ZNF618Q5T7W0 954 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 TRMT10BQ6PF06 316 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 KDELC2Q7Z4H8 507 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 MAP7D3Q8IWC1 876 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 SLC35B2Q8TB61 432 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 NUDCD1Q96RS6 583 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 MYCBPQ99417 103 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 CXorf56Q9H5V9 222 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 PPARGC1AQ9UBK2 798 aaKnown RBP14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 H3BRB1 525 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 ITGAVP06756 1048 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 AMPD1P23109 780 aa14.23□□□□□ -0.13
PRPF40B-209ENST00000548825 TRNP1Q6NT89 227 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms