RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 CCDC14Q49A88 953 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 CST9Q5W186 159 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 CYP4V2Q6ZWL3 525 aaPredicted RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 NME8Q8N427 588 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 RIBC1Q8N443 379 aaPredicted RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 DPEP3Q9H4B8 488 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 KLK14Q9P0G3 267 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 NME7Q9Y5B8 376 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 TMEM120BA0PK00 339 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 BCAT1P54687 386 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 GDF10P55107 478 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 ATP11AP98196 1134 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 ROR1Q01973 937 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 BST2Q10589 180 aaKnown RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 XRCC4Q13426 336 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 DPYSL3Q14195 570 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 PDK2Q15119 407 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 SV2CQ496J9 727 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 VSTM1Q6UX27 236 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 FAM172AQ8WUF8 416 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 SLC35F5Q8WV83 523 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 TEKT4Q8WW24 435 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 DYDC1Q8WWB3 177 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 SOCS4Q8WXH5 440 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 ELAC2Q9BQ52 826 aaKnown RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 PHACTR1Q9C0D0 580 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 ACTL7BQ9Y614 415 aa14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.38□□□□□ -0.11
LDLRAD3-202ENST00000524419 EXOC1LA0A1B0GW35 172 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 VGLL3A8MV65 326 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 ENDOD1O94919 500 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 ADORA2BP29275 332 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 GNL1P36915 607 aaPredicted RBP14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 IFNAR2P48551 515 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 TAF6P49848 677 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 GTF2A1P52655 376 aaPredicted RBP14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 ARL4CP56559 192 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 MMRN1Q13201 1228 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 NOMO1Q15155 1222 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 HIF1AQ16665 826 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 RAB6CQ53S08 254 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 SCYL2Q6P3W7 929 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 ZBED8Q8IZ13 594 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 SPATA18Q8TC71 538 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 KBTBD7Q8WVZ9 684 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 TBCBQ99426 244 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 RAB6CQ9H0N0 254 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 VPS37BQ9H9H4 285 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 RNF19AQ9NV58 838 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
LDLRAD3-202ENST00000524419 SMAPO00193 183 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 PAPSS1O43252 624 aaPredicted RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 SNX3O60493 162 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 RBP3P10745 1247 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CCDC130P13994 396 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 RPL22P35268 128 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 MNAT1P51948 309 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 PDIA2Q13087 525 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 DARS2Q6PI48 645 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 UNC45BQ8IWX7 931 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 SCUBE3Q8IX30 993 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 FUKQ8N0W3 1084 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CRYBG2Q8N1P7 616 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 FAM71DQ8N9W8 422 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 IPPQ9Y573 584 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 GOLGA8MH3BSY2 632 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 ALOX15BO15296 676 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 OAS1P00973 400 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 FGFR1P11362 822 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 SCNN1AP37088 669 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 NR1H3Q13133 447 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 FASTKD3Q14CZ7 662 aaKnown RBP14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 TMED2Q15363 201 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 NPNTQ6UXI9 565 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CKAP2Q8WWK9 683 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 CPT1BQ92523 772 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 SGSM3Q96HU1 749 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 RNF157Q96PX1 679 aa14.36□□□□□ -0.11
LDLRAD3-202ENST00000524419 LPIN3Q9BQK8 851 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms