RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 DHRS13Q6UX07 377 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 DDX42Q86XP3 938 aaKnown RBP eCLIP18.71■□□□□ 0.59
PVT1-220ENST00000524165 SCN4BQ8IWT1 228 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 OTUB2Q96DC9 234 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 MRGPRX1Q96LB2 322 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 CEP295NLQ96MC4 621 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 GABRG3Q99928 467 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 RNF38Q9H0F5 515 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 DPP3Q9NY33 737 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 GTF3C4Q9UKN8 822 aa18.71■□□□□ 0.59
PVT1-220ENST00000524165 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.71■□□□□ 0.59
PVT1-220ENST00000524165 A0A0B4J269 797 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 B8ZZF3 427 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 HOXC11O43248 304 aaPredicted RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 TULP3O75386 442 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 PIGRP01833 764 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 GRK6P43250 576 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 MAGEA11P43364 429 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 PPP3CCP48454 512 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 MYO1EQ12965 1108 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 METTL3Q86U44 580 aaKnown RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 SPATA2LQ8IUW3 424 aaPredicted RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 PDCL2Q8N4E4 241 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 FAM181AQ8N9Y4 354 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 SNX29Q8TEQ0 813 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 SPATA17Q96L03 361 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 MIR1-1HGQ9H1L0 117 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 DDX43Q9NXZ2 648 aaKnown RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 WSB2Q9NYS7 404 aaPredicted RBP18.7■□□□□ 0.58
PVT1-220ENST00000524165 CFAP97Q9P2B7 532 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
PVT1-220ENST00000524165 SCAMP3O14828 347 aaKnown RBP18.69■□□□□ 0.58
PVT1-220ENST00000524165 HNRNPDLO14979 420 aaKnown RBP18.69■□□□□ 0.58
PVT1-220ENST00000524165 WISP1O95388 367 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 NCAM1P13591 858 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 HNF1BP35680 557 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 PNPLA4P41247 253 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 NCKAP1LP55160 1127 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 MYL7Q01449 175 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 RTP5Q14D33 572 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 ZNF174Q15697 407 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 EGFLAMQ63HQ2 1017 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 CHPFQ8IZ52 775 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 NAT16Q8N8M0 369 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 TOE1Q96GM8 510 aaKnown RBP18.69■□□□□ 0.58
PVT1-220ENST00000524165 ZNF560Q96MR9 790 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 MSTO1Q9BUK6 570 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 NRSN2Q9GZP1 204 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 EHD2Q9NZN4 543 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 AK5Q9Y6K8 562 aa18.69■□□□□ 0.58
PVT1-220ENST00000524165 COL5A1P20908 1838 aaPredicted RBP18.69■□□□□ 0.58
PVT1-220ENST00000524165 USP9XQ93008 2570 aaPredicted RBP18.68■□□□□ 0.58
PVT1-220ENST00000524165 E2F8A0AVK6 867 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 ZNF840PA6NDX5 716 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 REC8O95072 547 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 TLE3Q04726 772 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 TRIM29Q14134 588 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 CCDC157Q569K6 752 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 DCAF12L1Q5VU92 463 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 TMEM86AQ8N2M4 240 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 IGSF22Q8N9C0 903 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 ACOX2Q99424 681 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 TTLL2Q9BWV7 592 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
PVT1-220ENST00000524165 METTL12A8MUP2 240 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 OAS1P00973 400 aaKnown RBP18.67■□□□□ 0.58
PVT1-220ENST00000524165 CDK4P11802 303 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 JUPP14923 745 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 SCP2P22307 547 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 ACAT1P24752 427 aaKnown RBP18.67■□□□□ 0.58
PVT1-220ENST00000524165 CXADRP78310 365 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 RHDQ02161 417 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
PVT1-220ENST00000524165 DENND5BQ6ZUT9 1274 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 C1orf216Q8TAB5 229 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 GPR174Q9BXC1 333 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 RAB34Q9BZG1 259 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 SLC6A17Q9H1V8 727 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 GMIPQ9P107 970 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
PVT1-220ENST00000524165 LARSQ9P2J5 1176 aaKnown RBP18.67■□□□□ 0.58
PVT1-220ENST00000524165 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 PCDHGA1Q9Y5H4 931 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 MYH10P35580 1976 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 COL12A1Q99715 3063 aa18.67■□□□□ 0.58
PVT1-220ENST00000524165 GFRA2O00451 464 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 PCDHGA12O60330 932 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 HUS1O60921 280 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 USP46P62068 366 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 RAD51AP2Q09MP3 1159 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 VSTM1Q6UX27 236 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 FGF11Q92914 225 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 DUSP9Q99956 384 aaKnown RBP18.66■□□□□ 0.58
PVT1-220ENST00000524165 ITM2CQ9NQX7 267 aa18.66■□□□□ 0.58
PVT1-220ENST00000524165 A0A1B0GVT2 93 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 PYCARD-AS1I3L0S3 204 aa18.65■□□□□ 0.58
PVT1-220ENST00000524165 PCSK1P29120 753 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms