RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 NUP107P57740 925 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 CCNG2Q16589 344 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 UBE2SQ16763 222 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 USP41Q3LFD5 358 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 FAM209AQ5JX71 171 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 SPOPLQ6IQ16 392 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 DCLRE1AQ6PJP8 1040 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 USP17L2Q6R6M4 530 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 CLVS1Q8IUQ0 354 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-224ENST00000524126 ALLCQ8N6M5 410 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 DDHD1Q8NEL9 900 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 ETNPPLQ8TBG4 499 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 ITPKCQ96DU7 683 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 REEP2Q9BRK0 252 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
SPIDR-224ENST00000524126 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 SSX2IPQ9Y2D8 614 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 NUB1Q9Y5A7 615 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 H0YIN7 160 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 PDXKO00764 312 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 DNALI1O14645 258 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-224ENST00000524126 MED24O75448 989 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 ZNF23P17027 643 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-224ENST00000524126 MAN1A1P33908 653 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 BST1Q10588 318 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 SF3B4Q15427 424 aaKnown RBP eCLIP10.59□□□□□ -0.715e-7■■□□□ 13.2
SPIDR-224ENST00000524126 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 PGM2L1Q6PCE3 622 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 TMCO5AQ8N6Q1 288 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 BBOF1Q8ND07 529 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 BORCS5Q969J3 196 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 CGREF1Q99674 301 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 CEP44Q9C0F1 390 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 KLC2Q9H0B6 622 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 C1orf21Q9H246 121 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 C10orf71Q711Q0 1435 aa10.59□□□□□ -0.71
SPIDR-224ENST00000524126 DENND3A2RUS2 1198 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 C6orf229H3BNL8 230 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 PSMD12O00232 456 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CALCAP01258 141 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 BMP3P12645 472 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CD247P20963 164 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 MZF1P28698 734 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CYP2J2P51589 502 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 ATXN3P54252 364 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SLC12A3P55017 1021 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 GPS1Q13098 491 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SEPT6Q14141 434 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 NIPAL1Q6NVV3 410 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CDHR3Q6ZTQ4 885 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 KBTBD6Q86V97 674 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CHSY1Q86X52 802 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 RTKN2Q8IZC4 609 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SLC44A5Q8NCS7 719 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 JADE3Q92613 823 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 C12orf43Q96C57 262 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 NSUN4Q96CB9 384 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 HGH1Q9BTY7 390 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 C20orf27Q9GZN8 174 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 WWP1Q9H0M0 922 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 COPS7BQ9H9Q2 264 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 KLHL11Q9NVR0 708 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 RNF11Q9Y3C5 154 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SOBPA7XYQ1 873 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 EML1O00423 815 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SLC16A3O15427 465 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 AQP9O43315 295 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A9O60656 530 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 ZC3H11AO75152 810 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 MTA2O94776 668 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 MT-ND3P03897 115 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 FDX1P10109 184 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A6P19224 532 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A1P22309 533 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A4P22310 534 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 GLRA2P23416 452 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 HMOX2P30519 316 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A3P35503 534 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 UGT1A5P35504 534 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 ALDH3B2P48448 385 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 RPS3AP61247 264 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 PSMC1P62191 440 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 IRX4P78413 519 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 TMPRSS15P98073 1019 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 MYL7Q01449 175 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 KCNJ8Q15842 424 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 SLC15A2Q16348 729 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 DOK7Q18PE1 504 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 PPP6R3Q5H9R7 873 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 DCAKDQ8WVC6 231 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 TMEM47Q9BQJ4 181 aa10.58□□□□□ -0.72
SPIDR-224ENST00000524126 TRIM56Q9BRZ2 755 aaKnown RBP10.58□□□□□ -0.72
SPIDR-224ENST00000524126 CAAP1Q9H8G2 361 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms