RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZSWIM9Q86XI8 627 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 LIX1LQ8IVB5 337 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PIK3C3Q8NEB9 887 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZSCAN18Q8TBC5 510 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MRGPRX1Q96LB2 322 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 RMDN3Q96TC7 470 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 SPATA6Q9NWH7 488 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 C9orf78Q9NZ63 289 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 AJAP1Q9UKB5 411 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCDHA6Q9UN73 950 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCDHGB2Q9Y5G2 931 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 USP16Q9Y5T5 823 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 LRRFIP2Q9Y608 721 aaKnown RBP5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF804BA4D1E1 1349 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF536O15090 1300 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MYO3BQ8WXR4 1341 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 DMDP11532 3685 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 ASPMQ8IZT6 3477 aa5.42□□□□□ -1.54
HMGB1P23-201ENST00000518743 MBD3L4A6NDZ8 208 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MBD3L3A6NE82 208 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 TMEM221A6NGB7 291 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 NT5C1B-RDH14C9J2C7 533 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PRRT4C9JH25 899 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 M0R296 226 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 AREL1O15033 823 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 SEMA7AO75326 666 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MED26O95402 600 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MYL4P12829 197 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 FGFR2P21802 821 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 KCNA5P22460 613 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PTPN7P35236 360 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MAPK9P45984 424 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PPIL2Q13356 520 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 SULT6B1Q6IMI4 303 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 FBXO38Q6PIJ6 1188 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 USP17L6PQ6QN14 398 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 RNF44Q7L0R7 432 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF572Q7Z3I7 529 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 KRT73Q86Y46 540 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PDSS2Q86YH6 399 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PLXDC1Q8IUK5 500 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRMT2AQ8IZ69 625 aaKnown RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 NAXEQ8NCW5 288 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 CCDC150Q8NCX0 1101 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PPHLN1Q8NEY8 458 aaKnown RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 IL17RDQ8NFM7 739 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 TRIB2Q92519 343 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MPP4Q96JB8 637 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 SNX22Q96L94 193 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 GORASP1Q9BQQ3 440 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 UTP14AQ9BVJ6 771 aaKnown RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 TMEM120AQ9BXJ8 343 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 CARD11Q9BXL7 1154 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 L2HGDHQ9H9P8 463 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MSL2Q9HCI7 577 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 A1CFQ9NQ94 594 aaKnown RBP5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 SACM1LQ9NTJ5 587 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 FAM53CQ9NYF3 392 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 CPNE7Q9UBL6 633 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 MUTYHQ9UIF7 546 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PCDHA5Q9Y5H7 936 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 PTPN13Q12923 2485 aa5.41□□□□□ -1.54
HMGB1P23-201ENST00000518743 RLFQ13129 1914 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 TEX51A0A1B0GUA7 166 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 CYSRT1A8MQ03 144 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 KBTBD13C9JR72 458 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 MYO1CO00159 1063 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 F2RL2O00254 374 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 BTN3A1O00481 513 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 N4BP3O15049 544 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 AMY1AP04745 511 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 CD1AP06126 327 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 DHRS4L1P0CG22 281 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 VSIG10L2P0DP72 767 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 HARSP12081 509 aaKnown RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 XRCC6P12956 609 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ALAS1P13196 640 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 CYP2B6P20813 491 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 KLRC1P26715 233 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 CCND3P30281 292 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 STAT5BP51692 787 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 RBM5P52756 815 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 FOXO4P98177 505 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC13A2Q13183 592 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 DDX10Q13206 875 aaKnown RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC35G1Q2M3R5 365 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF568Q3ZCX4 644 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ARL6IP4Q66PJ3 421 aaKnown RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 MPZL3Q6UWV2 235 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SLC39A5Q6ZMH5 540 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 SYDE1Q6ZW31 735 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 ZNF605Q86T29 641 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 IL17REQ8NFR9 667 aa5.4□□□□□ -1.54
HMGB1P23-201ENST00000518743 MZB1Q8WU39 189 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms