RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 MAELQ96JY0 434 aaKnown RBP8.45□□□□□ -1.06
NUP54-215ENST00000514313 COG8Q96MW5 612 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 WDR24Q96S15 920 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 GPR20Q99678 358 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 SLC26A6Q9BXS9 759 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 VPS16Q9H269 839 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 ELAC1Q9H777 363 aaKnown RBP8.45□□□□□ -1.06
NUP54-215ENST00000514313 FPGT-TNNI3KV9GXZ4 949 aa8.45□□□□□ -1.06
NUP54-215ENST00000514313 MYADML2A6NDP7 307 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 TRIM24O15164 1050 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 HOXC11O43248 304 aaPredicted RBP8.44□□□□□ -1.06
NUP54-215ENST00000514313 SCAF4O95104 1147 aaKnown RBP8.44□□□□□ -1.06
NUP54-215ENST00000514313 CD4P01730 458 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 ACO1P21399 889 aaKnown RBP8.44□□□□□ -1.06
NUP54-215ENST00000514313 PRKAR1BP31321 381 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 AARSP49588 968 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP54-215ENST00000514313 TIAL1Q01085 375 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP54-215ENST00000514313 CYP2A13Q16696 494 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 ICE2Q659A1 982 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 C1QL4Q86Z23 238 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 NACC2Q96BF6 587 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 RNF31Q96EP0 1072 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 OSBPL9Q96SU4 736 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 SSBP3Q9BWW4 388 aaPredicted RBP8.44□□□□□ -1.06
NUP54-215ENST00000514313 TWSG1Q9GZX9 223 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 RIMKLBQ9ULI2 386 aa8.44□□□□□ -1.06
NUP54-215ENST00000514313 C19orf53Q9UNZ5 99 aaPredicted RBP8.44□□□□□ -1.06
NUP54-215ENST00000514313 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.44□□□□□ -1.06
NUP54-215ENST00000514313 A6NLC8 198 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 PATE3B3GLJ2 98 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 TRIAP1O43715 76 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 RPP40O75818 363 aaKnown RBP8.43□□□□□ -1.06
NUP54-215ENST00000514313 ZSCAN22P10073 491 aaPredicted RBP8.43□□□□□ -1.06
NUP54-215ENST00000514313 CFPP27918 469 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 GATMP50440 423 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 TUBP50607 506 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 SP2Q02086 613 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 TLE2Q04725 743 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
NUP54-215ENST00000514313 CRHR2Q13324 411 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 CLEC9AQ6UXN8 241 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 ABRAQ8N0Z2 381 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 ATG4AQ8WYN0 398 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 SDCCAG3Q96C92 435 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 FAM89AQ96GI7 184 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 ZCWPW1Q9H0M4 648 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
NUP54-215ENST00000514313 SMC4Q9NTJ3 1288 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 SWAP70Q9UH65 585 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 SLC13A4Q9UKG4 626 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 USP22Q9UPT9 525 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 MAP3K2Q9Y2U5 619 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 TMEM98Q9Y2Y6 226 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 XDHP47989 1333 aa8.43□□□□□ -1.06
NUP54-215ENST00000514313 MARCH11A6NNE9 402 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 SNX2O60749 519 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 CBFA2T3O75081 653 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 XBP1P17861 261 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 EPHA3P29320 983 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 HIBADHP31937 336 aaKnown RBP8.42□□□□□ -1.06
NUP54-215ENST00000514313 CCR5P51681 352 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 FAM189BP81408 668 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 SLC12A1Q13621 1099 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
NUP54-215ENST00000514313 HYIQ5T013 277 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 FAM180BQ6P0A1 224 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 GLB1LQ6UWU2 654 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 C1orf122Q6ZSJ8 110 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 NME8Q8N427 588 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 CEP70Q8NHQ1 597 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 SUN3Q8TAQ9 357 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 Q8TCH9 128 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 OSCP1Q8WVF1 389 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 WDR60Q8WVS4 1066 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 HTRA1Q92743 480 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 GOLGA1Q92805 767 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 FAM136AQ96C01 138 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 TOX2Q96NM4 488 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 NUDT22Q9BRQ3 303 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 C17orf80Q9BSJ5 609 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 BRD8Q9H0E9 1235 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 UNC45AQ9H3U1 944 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 ZNF768Q9H5H4 540 aaKnown RBP8.42□□□□□ -1.06
NUP54-215ENST00000514313 UNKLQ9H9P5 680 aaKnown RBP8.42□□□□□ -1.06
NUP54-215ENST00000514313 G6PC2Q9NQR9 355 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 CNTN6Q9UQ52 1028 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 SLC27A6Q9Y2P4 619 aa8.42□□□□□ -1.06
NUP54-215ENST00000514313 FER1L4A9Z1Z3 1794 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 COL15A1P39059 1388 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 KRT38O76015 456 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
NUP54-215ENST00000514313 BMP7P18075 431 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 GATA3P23771 443 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 MAN1A1P33908 653 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 CASP2P42575 452 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 JAG1P78504 1218 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 UBE3AQ05086 875 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 TRPC3Q13507 836 aa8.41□□□□□ -1.06
NUP54-215ENST00000514313 CSHL1Q14406 222 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms