RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 MYCBPAPQ8TBZ2 947 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 SNX27Q96L92 541 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 NAALADL1Q9UQQ1 740 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 FAM155BO75949 473 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 TTC4O95801 387 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
HCN3-204ENST00000496230 BRAFP15056 766 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 RBL1P28749 1068 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 RPL22P35268 128 aaKnown RBP12.49□□□□□ -0.41
HCN3-204ENST00000496230 PBX3P40426 434 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 LILRA4P59901 499 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCN3-204ENST00000496230 MPP2Q14168 576 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 OSTM1Q86WC4 334 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 LINC01465Q8N7H1 131 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 B3GALT6Q96L58 329 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 AGAP3Q96P47 875 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 ASNSD1Q9NWL6 643 aa12.49□□□□□ -0.41
HCN3-204ENST00000496230 CEP290O15078 2479 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 TCRBV5S1A1TA0A578 114 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 MYBPHLA2RUH7 354 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 RASA4BC9J798 803 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 M0QZ92 97 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CAPN9O14815 690 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 RASA4O43374 803 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 GRIA1P42261 906 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 IRX4P78413 519 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 SLMAPQ14BN4 828 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CYP1B1Q16678 543 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 SYPL2Q5VXT5 272 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CASC4Q6P4E1 433 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 SMG8Q8ND04 991 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 XPO7Q9UIA9 1087 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 NUP205Q92621 2012 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 RRN3P2A6NIE6 340 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 H0YHG0 523 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 ASGR1P07306 291 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CPT1AP50416 773 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CACNA2D1P54289 1103 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 C3orf62Q6ZUJ4 267 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 PIGZQ86VD9 579 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 CEP57Q86XR8 500 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 LGMNQ99538 433 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 SNRNP25Q9BV90 132 aaKnown RBP12.48□□□□□ -0.41
HCN3-204ENST00000496230 PCDHGC3Q9UN70 934 aa12.48□□□□□ -0.41
HCN3-204ENST00000496230 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 MCF2LO15068 1137 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 IVLP07476 585 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 GOT1P17174 413 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 RGS2P41220 211 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 PTK6Q13882 451 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 KCNA10Q16322 511 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 PKN2Q16513 984 aaKnown RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 LRRC34Q8IZ02 419 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 DEFB106AQ8N104 65 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 PYROXD1Q8WU10 500 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 FAF2Q96CS3 445 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 MYCBPQ99417 103 aaPredicted RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 EPN3Q9H201 632 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 PRG3Q9Y2Y8 225 aaPredicted RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.47□□□□□ -0.41
HCN3-204ENST00000496230 ITGB1P05556 798 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 KRT7P08729 469 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 MORN1Q5T089 497 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 CES3Q6UWW8 571 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 KBTBD7Q8WVZ9 684 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 RNF34Q969K3 372 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 TMEM209Q96SK2 561 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 TBCBQ99426 244 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 FGFR1OP2Q9NVK5 253 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 TCP11X1B4DZS4 312 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 USP12O75317 370 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 PAEPP09466 180 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 SRGAP2BP0DMP2 458 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
HCN3-204ENST00000496230 FAM133BQ5BKY9 247 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms