RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SLC47A2Q86VL8 602 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 ARL14EPQ8N8R7 260 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-208ENST00000494334 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 KCTD13Q8WZ19 329 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 EDAQ92838 391 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 RSPRY1Q96DX4 576 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 LRRC3BQ96PB8 259 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 SMG9Q9H0W8 520 aaKnown RBP14.28□□□□□ -0.12
COL1A1-208ENST00000494334 NLRC4Q9NPP4 1024 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 DAAM1Q9Y4D1 1078 aa14.28□□□□□ -0.12
COL1A1-208ENST00000494334 MYO10Q9HD67 2058 aa14.27□□□□□ -0.12
COL1A1-208ENST00000494334 GREB1Q4ZG55 1949 aa14.27□□□□□ -0.12
COL1A1-208ENST00000494334 TRAV19A0A0A6YYK7 116 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 F8VZ95 297 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 HDCP19113 662 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 TKTL1P51854 596 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 JAM2P57087 298 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 BPIFB4P59827 614 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 GPC5P78333 572 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 MEA1Q16626 185 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 DENND1BQ6P3S1 775 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 CCDC186Q7Z3E2 898 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 MFSD6LQ8IWD5 586 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.13
COL1A1-208ENST00000494334 E2F7Q96AV8 911 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 HSFY1Q96LI6 401 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 RNF38Q9H0F5 515 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 LRRC4Q9HBW1 653 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 OBP2AQ9NY56 170 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 CCL26Q9Y258 94 aa14.27□□□□□ -0.13
COL1A1-208ENST00000494334 A0A1W2PQC6 194 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 DPYSL4O14531 572 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 GABBR2O75899 941 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 OLFM2O95897 454 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 OAS1P00973 400 aaKnown RBP14.26□□□□□ -0.13
COL1A1-208ENST00000494334 USP17L7P0C7H9 530 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 SRFP11831 508 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 CYP11B1P15538 503 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 PFKLP17858 780 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 PSMC3P17980 439 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 RGS7P49802 495 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 UBASH3AP57075 661 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 GRM2Q14416 872 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 HECTD3Q5T447 861 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 PM20D1Q6GTS8 502 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 SCD5Q86SK9 330 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 CELF5Q8N6W0 485 aaKnown RBP14.26□□□□□ -0.13
COL1A1-208ENST00000494334 RNF214Q8ND24 703 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 DEPDC1BQ8WUY9 529 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 SPAG5Q96R06 1193 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 NMUR1Q9HB89 426 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 TLR8Q9NR97 1041 aaKnown RBP14.26□□□□□ -0.13
COL1A1-208ENST00000494334 TDP1Q9NUW8 608 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 PCDHGC3Q9UN70 934 aa14.26□□□□□ -0.13
COL1A1-208ENST00000494334 A0A1W2PQH9 124 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 COCHO43405 550 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 ZBED1O96006 694 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 CKMP06732 381 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 LCP1P13796 627 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 SOX5P35711 763 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 STAT1P42224 750 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
COL1A1-208ENST00000494334 TUBP50607 506 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 PDE6CP51160 858 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 ZXDBP98169 803 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 SIGLEC14Q08ET2 396 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 ADIGQ0VDE8 80 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-208ENST00000494334 WDTC1Q8N5D0 677 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 RIN3Q8TB24 985 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 BPIFB1Q8TDL5 484 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 NDRG1Q92597 394 aaKnown RBP14.25□□□□□ -0.13
COL1A1-208ENST00000494334 TRMT61BQ9BVS5 477 aaKnown RBP14.25□□□□□ -0.13
COL1A1-208ENST00000494334 CCSER2Q9H7U1 834 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 SLC2A4RGQ9NR83 387 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 ARHGAP26Q9UNA1 814 aa14.25□□□□□ -0.13
COL1A1-208ENST00000494334 PIK3R2O00459 728 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 TLR5O60602 858 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 GFPT2O94808 682 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 KRT9P35527 623 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 PBX1P40424 430 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 PSEN1P49768 467 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 SLC7A9P82251 487 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 FCHO2Q0JRZ9 810 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 TRIM67Q6ZTA4 783 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 BHLHA9Q7RTU4 235 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
COL1A1-208ENST00000494334 SIX6OS1Q8N1H7 587 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 SCML4Q8N228 414 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 STK32AQ8WU08 396 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 DDX1Q92499 740 aaKnown RBP14.24□□□□□ -0.13
COL1A1-208ENST00000494334 SLC4A5Q9BY07 1137 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 LHX5Q9H2C1 402 aa14.24□□□□□ -0.13
COL1A1-208ENST00000494334 KIF9Q9HAQ2 790 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms