RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SERTAD4Q9NUC0 356 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 MAN2B2Q9Y2E5 1009 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 PCDHGB2Q9Y5G2 931 aa5.8□□□□□ -1.48
HMGB1P38-201ENST00000490557 CCNT2O60583 730 aaKnown RBP5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 COQ9O75208 318 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 NUDT3O95989 172 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 LMNAP02545 664 aaKnown RBP5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 ERBB2P04626 1255 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 CD19P15391 556 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 ATICP31939 592 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 CACNA2D1P54289 1103 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 FAXCQ5TGI0 409 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 CRTC1Q6UUV9 634 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 SLC29A4Q7RTT9 530 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 RASAL3Q86YV0 1011 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 SAMD3Q8N6K7 520 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 SIRT6Q8N6T7 355 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 SIMC1Q8NDZ2 872 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 NGDNQ8NEJ9 315 aaKnown RBP5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 ABHD11Q8NFV4 315 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 RP9Q8TA86 221 aaKnown RBP5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 AGAP2Q99490 1192 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 TMOD4Q9NZQ9 345 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 CAPN11Q9UMQ6 739 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 LRCH1Q9Y2L9 728 aa5.79□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZAR1LA6NP61 321 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 PODXLO00592 558 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 ABCB4P21439 1286 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 GPD1P21695 349 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 BMP5P22003 454 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 EEF1GP26641 437 aaKnown RBP5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 RHBDL3P58872 404 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 SLC35G1Q2M3R5 365 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 PCID2Q5JVF3 399 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 MANEALQ5VSG8 457 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 DENND2CQ68D51 928 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 XRRA1Q6P2D8 792 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 ARHGEF25Q86VW2 580 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 FSTL5Q8N475 847 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 KIAA1191Q96A73 305 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 RSPRY1Q96DX4 576 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 UROC1Q96N76 676 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 ZBTB26Q9HCK0 441 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 IL17RBQ9NRM6 502 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 FNIP2Q9P278 1114 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 NKX1-2Q9UD57 310 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 MAGED2Q9UNF1 606 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 ENTPD2Q9Y5L3 495 aa5.78□□□□□ -1.48
HMGB1P38-201ENST00000490557 AP4M1O00189 453 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 EXOC5O00471 708 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 CES2O00748 559 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 MGST3O14880 152 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 HNRNPDLO14979 420 aaKnown RBP5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 SETSIPP0DME0 302 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 RBL1P28749 1068 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 NTSR1P30989 418 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 TECP42680 631 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 HSPA7P48741 367 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 SOX10P56693 466 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 TIRAPP58753 221 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 TIAL1Q01085 375 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 GPS1Q13098 491 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 BIRC2Q13490 618 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 STARD3Q14849 445 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 AARS2Q5JTZ9 985 aaKnown RBP5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 DGKKQ5KSL6 1271 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 L1TD1Q5T7N2 865 aaKnown RBP5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 MRNIPQ6NTE8 343 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 C1orf228Q6PIY5 440 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 CLEC9AQ6UXN8 241 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 DPY19L3Q6ZPD9 716 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 Q6ZWC4 215 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 SYTL1Q8IYJ3 562 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 C11orf44Q8N8P7 122 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 FAM227BQ96M60 508 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 DUSP22Q9NRW4 184 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 ASB6Q9NWX5 421 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 DLL3Q9NYJ7 618 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 STEAP1Q9UHE8 339 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 ADAMTS5Q9UNA0 930 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 DAAM1Q9Y4D1 1078 aa5.77□□□□□ -1.49
HMGB1P38-201ENST00000490557 H0YIZ8 118 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 NDST3O95803 873 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 ELFN1P0C7U0 828 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 JUPP14923 745 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 DRD4P21917 467 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 GKP32189 559 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 HTR3AP46098 478 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 E2F1Q01094 437 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 MPEG1Q2M385 716 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 MTHFD1LQ6UB35 978 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 PCSK4Q6UW60 755 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 ABHD5Q8WTS1 349 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 TBC1D5Q92609 795 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 MUL1Q969V5 352 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 GRAMD1AQ96CP6 724 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 ZG16BQ96DA0 208 aa5.76□□□□□ -1.49
HMGB1P38-201ENST00000490557 VPS50Q96JG6 964 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms