RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 STPG1Q5TH74 334 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 SHC4Q6S5L8 630 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 UNC13DQ70J99 1090 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 FILIP1Q7Z7B0 1213 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 DDX42Q86XP3 938 aaKnown RBP eCLIP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 NELFCDQ8IXH7 590 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 C12orf56Q8IXR9 622 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 B3GALNT2Q8NCR0 500 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 OR6B3Q8NGW1 331 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 SYAP1Q96A49 352 aaPredicted RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 CCDC127Q96BQ5 260 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 SLITRK1Q96PX8 696 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 C7orf25Q9BPX7 421 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 ZNF518BQ9C0D4 1074 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 XYLT2Q9H1B5 865 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 LINC00597Q9H2U6 94 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 RXFP3Q9NSD7 469 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 CGNQ9P2M7 1197 aaKnown RBP9.09□□□□□ -0.95
PRKCB-208ENST00000487674 NME7Q9Y5B8 376 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 CPQQ9Y646 472 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 NUP205Q92621 2012 aa9.09□□□□□ -0.95
PRKCB-208ENST00000487674 ATP8B3O60423 1300 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 USP24Q9UPU5 2620 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 BCLAF3A2AJT9 711 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 A8MXQ7 604 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 K7EQS6 105 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TM4SF5O14894 197 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 DCLK1O15075 740 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 RTN3O95197 1032 aaPredicted RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 ADH1CP00326 375 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 CST3P01034 146 aaPredicted RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 PTPN1P18031 435 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 PMLP29590 882 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 GBP1P32455 592 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 DGKEP52429 567 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 CACNA2D1P54289 1103 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 SEC13P55735 322 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 MYL6P60660 151 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 COPS2P61201 443 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 MRPS21P82921 87 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TAF10Q12962 218 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TRPC3Q13507 836 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 HSF5Q4G112 596 aaPredicted RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 USP39Q53GS9 565 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 C2orf27AQ580R0 203 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TDRD10Q5VZ19 366 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TCEAL6Q6IPX3 200 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 RASSF3Q86WH2 238 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 OVCA2Q8WZ82 227 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TCEAL3Q969E4 200 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 EDEM2Q9BV94 578 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 RNF38Q9H0F5 515 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 DPEP3Q9H4B8 488 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 SMOC1Q9H4F8 434 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 VRTNQ9H8Y1 702 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 SMPD4Q9NXE4 827 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 CFAP97Q9P2B7 532 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 TFIP11Q9UBB9 837 aaKnown RBP9.08□□□□□ -0.96
PRKCB-208ENST00000487674 MMP17Q9ULZ9 603 aa9.08□□□□□ -0.96
PRKCB-208ENST00000487674 PLXND1Q9Y4D7 1925 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 THADAQ6YHU6 1953 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.07□□□□□ -0.96
PRKCB-208ENST00000487674 CLDN5O00501 218 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 CLIC2O15247 247 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 POLR2DO15514 142 aaKnown RBP9.07□□□□□ -0.96
PRKCB-208ENST00000487674 PHACTR2O75167 634 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 CAVIN2O95810 425 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ABL1P00519 1130 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 MBL2P11226 248 aaPredicted RBP9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ADH5P11766 374 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 YWHAQP27348 245 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 TUBP50607 506 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 SHC2P98077 582 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 CREB5Q02930 508 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 DHCR24Q15392 516 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 CRY1Q16526 586 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ST3GAL2Q16842 350 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 KNOP1Q1ED39 458 aaKnown RBP9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ZNF699Q32M78 642 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 PMS2CLQ68D20 193 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 RNF43Q68DV7 783 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ANO7Q6IWH7 933 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 FAM35AQ86V20 835 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 ADGRG2Q8IZP9 1017 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 NUP93Q8N1F7 819 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 MDGA1Q8NFP4 955 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 GOLGA5Q8TBA6 731 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 OTUB2Q96DC9 234 aa9.07□□□□□ -0.96
PRKCB-208ENST00000487674 TNIP3Q96KP6 325 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms