RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 DNTTP04053 509 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 CPA1P15085 419 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 LRPAP1P30533 357 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 ACTN2P35609 894 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 PSMC2P35998 433 aaKnown RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 PGM1P36871 562 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 MAGEA10P43363 369 aaPredicted RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 LIMS1P48059 325 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 LILRA4P59901 499 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 ZBED6P86452 979 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 EIF4A2Q14240 407 aaKnown RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 ATXN7L2Q5T6C5 722 aaPredicted RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 SNX30Q5VWJ9 437 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 MFSD5Q6N075 450 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 XYLT1Q86Y38 959 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 TMEFF1Q8IYR6 380 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 ABHD5Q8WTS1 349 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 HMGB4Q8WW32 186 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 RABGGTAQ92696 567 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 PPP2R3CQ969Q6 453 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 FAM84AQ96KN4 292 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 YTHDC1Q96MU7 727 aaKnown RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 ASB2Q96Q27 587 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 GPR20Q99678 358 aa5.92□□□□□ -1.46
COPA-203ENST00000481040 BARX1Q9HBU1 254 aaPredicted RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 MBD1Q9UIS9 605 aaPredicted RBP5.92□□□□□ -1.46
COPA-203ENST00000481040 UBE2QL1A1L167 161 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 KIF28PB7ZC32 967 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 H3BNC9 293 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 STC2O76061 302 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 STARD3NLO95772 234 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 GLI1P08151 1106 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 CHRM3P20309 590 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 MAPK4P31152 587 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 ZEB1P37275 1124 aaPredicted RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 DGKEP52429 567 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 RNASE9P60153 205 aaKnown RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 PDCLQ13371 301 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 NFIXQ14938 502 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 FAM214AQ32MH5 1076 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 PTCHD3Q3KNS1 767 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 FBLN7Q53RD9 439 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 DGAT2L7PQ6IED9 249 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 LAYNQ6UX15 382 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 MED25Q71SY5 747 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 H1FNTQ75WM6 255 aaPredicted RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 LRRC8DQ7L1W4 858 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 RASGRP2Q7LDG7 609 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 CFAP52Q8N1V2 620 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 GALNT4Q8N4A0 578 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 ZFP28Q8NHY6 868 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 DNAJB14Q8TBM8 379 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 STAMQ92783 540 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 NSUN4Q96CB9 384 aaKnown RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 ZDHHC12Q96GR4 267 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 APOPT1Q96IL0 206 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 ZNF668Q96K58 619 aaPredicted RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 ZMAT2Q96NC0 199 aaKnown RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 SMOQ99835 787 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 NUDT22Q9BRQ3 303 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 TLR10Q9BXR5 811 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 TRIM5Q9C035 493 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 PDCL3Q9H2J4 239 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 VPS51Q9UID3 782 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 NFU1Q9UMS0 254 aa5.91□□□□□ -1.46
COPA-203ENST00000481040 MAGED1Q9Y5V3 778 aaPredicted RBP5.91□□□□□ -1.46
COPA-203ENST00000481040 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 SAC3D1A6NKF1 404 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CD3EAPO15446 510 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 TRIM13O60858 407 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CER1O95813 267 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 F9P00740 461 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 ITGB1P05556 798 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CYP21A2P08686 494 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 ACADMP11310 421 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 KCNA3P22001 575 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 RPL13P26373 211 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 ZNF134P52741 427 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 PRKAG1P54619 331 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 LOXL3P58215 753 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 RPP30P78346 268 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 ROR1Q01973 937 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 PIGFQ07326 219 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 SLFN5Q08AF3 891 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 SF3A3Q12874 501 aaKnown RBP eCLIP5.9□□□□□ -1.46
COPA-203ENST00000481040 MYO1EQ12965 1108 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CSHL1Q14406 222 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 RILPL1Q5EBL4 403 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 NOMO2Q5JPE7 1267 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 ZNF484Q5JVG2 852 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 NAA35Q5VZE5 725 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 SLC30A10Q6XR72 485 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 CPLX4Q7Z7G2 160 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 TRABD2AQ86V40 505 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 DIS3L2Q8IYB7 885 aaKnown RBP5.9□□□□□ -1.46
COPA-203ENST00000481040 SPARTQ8N0X7 666 aa5.9□□□□□ -1.46
COPA-203ENST00000481040 TTC30BQ8N4P2 665 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms