RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 PPM1AP35813 382 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 SCNN1AP37088 669 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 RPL34P49207 117 aaKnown RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 DNA2P51530 1060 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 MAP3K7CLP57077 242 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 RPL7AP62424 266 aaKnown RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 SLC6A3Q01959 620 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 PIGHQ14442 188 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 PTPROQ16827 1216 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 CCDC142Q17RM4 750 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 USP41Q3LFD5 358 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 SLC39A12Q504Y0 691 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TMEM240Q5SV17 173 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 KIAA1841Q6NSI8 718 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 CLEC20AQ6ZU45 233 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 FAM183BPQ6ZVS7 135 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TMCO2Q7Z6W1 182 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 SIX6OS1Q8N1H7 587 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 FNIP1Q8TF40 1166 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 BCL7CQ8WUZ0 217 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 KCTD13Q8WZ19 329 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 DPF3Q92784 378 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TMEM169Q96HH4 297 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 HES6Q96HZ4 224 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 IGSF21Q96ID5 467 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PBKQ96KB5 322 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 SLC9A7Q96T83 725 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PSMB7Q99436 277 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 UBXN6Q9BZV1 441 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TRIM7Q9C029 511 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 LRRC4Q9HBW1 653 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 METTL5Q9NRN9 209 aaKnown RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 SPG21Q9NZD8 308 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 RNF14Q9UBS8 474 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 TJP2Q9UDY2 1190 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PACSIN2Q9UNF0 486 aaPredicted RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
RPA3-205ENST00000462723 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
RPA3-205ENST00000462723 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PTPRDP23468 1912 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PTPRSQ13332 1948 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 NLRC5Q86WI3 1866 aa8.6□□□□□ -1.03
RPA3-205ENST00000462723 PAPSS1O43252 624 aaPredicted RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 SRGAP2O75044 1071 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 FBXO21O94952 628 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 GJB6O95452 261 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CPB1P15086 417 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 SYN1P17600 705 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 NDUFV2P19404 249 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 GPD1P21695 349 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 BDNFP23560 247 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 PSMA2P25787 234 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CTNNA2P26232 953 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CXCR5P32302 372 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CTNNA1P35221 906 aaKnown RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 RFC1P35251 1148 aaPredicted RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 PAFAH1B1P43034 410 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 SSR1P43307 286 aaKnown RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 TKTL1P51854 596 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 EPHB4P54760 987 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 RNASE9P60153 205 aaKnown RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 HTRA4P83105 476 aaPredicted RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 ADIGQ0VDE8 80 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 SMARCB1Q12824 385 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 ACAP1Q15027 740 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CLUL1Q15846 466 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 EFHC1Q5JVL4 640 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 RTP2Q5QGT7 225 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 OLFML1Q6UWY5 402 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 LRRTM3Q86VH5 581 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
RPA3-205ENST00000462723 SLC39A11Q8N1S5 342 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 FIBCD1Q8N539 461 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 NIPA2Q8N8Q9 360 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 COLGALT1Q8NBJ5 622 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 JOSD2Q8TAC2 188 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 PHOSPHO2Q8TCD6 241 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 HERVK_113Q902F9 699 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 FUBP3Q96I24 572 aaKnown RBP eCLIP8.59□□□□□ -1.03
RPA3-205ENST00000462723 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 B3GALT6Q96L58 329 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 MRGPRX2Q96LB1 330 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 TMEM209Q96SK2 561 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 SMOQ99835 787 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.03
RPA3-205ENST00000462723 CARD6Q9BX69 1037 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CARD9Q9H257 536 aa8.59□□□□□ -1.03
RPA3-205ENST00000462723 CSNK1G1Q9HCP0 422 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms