RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SYPP08247 313 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 GRIK1P39086 918 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 CACNA2D1P54289 1103 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 C4orf50Q6ZRC1 276 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 ZNF513Q8N8E2 541 aaPredicted RBP18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 NAT16Q8N8M0 369 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 CEP295NLQ96MC4 621 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 HSPA12BQ96MM6 686 aa18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 URB1O60287 2271 aaKnown RBP18.35■□□□□ 0.53
UBE2D4-209ENST00000454428 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 TBCAO75347 108 aaKnown RBP18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 TULP3O75386 442 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 KRT18P05783 430 aaKnown RBP18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 NDUFV2P19404 249 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 WASP42768 502 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 NOP14P78316 857 aaKnown RBP18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 GRIN1Q05586 938 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 TAF10Q12962 218 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 TOGARAM2Q6ZUX3 1019 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 GLRX5Q86SX6 157 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 SFR1Q86XK3 245 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 KCNV2Q8TDN2 545 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 PCED1BQ96HM7 432 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 ZNF419Q96HQ0 510 aaPredicted RBP18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 LRIG1Q96JA1 1093 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 AK8Q96MA6 479 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 MTMR12Q9C0I1 747 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 SCUBE2Q9NQ36 999 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 CDH9Q9ULB4 789 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 CYP8B1Q9UNU6 501 aa18.34■□□□□ 0.53
UBE2D4-209ENST00000454428 PTPRJQ12913 1337 aa18.33■□□□□ 0.53
UBE2D4-209ENST00000454428 TBC1D3BA6NDS4 549 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 HOXC11O43248 304 aaPredicted RBP18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 KRT19P08727 400 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 HOXB2P14652 356 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 PPP3CCP48454 512 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 GRIK2Q13002 908 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 POSTNQ15063 836 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 PLEKHG6Q3KR16 790 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 ADAM32Q8TC27 787 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 CACTINQ8WUQ7 758 aaKnown RBP18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 WBP2Q969T9 261 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 HVCN1Q96D96 273 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 ERLEC1Q96DZ1 483 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 CALML4Q96GE6 196 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 ACOX2Q99424 681 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 SLC6A17Q9H1V8 727 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 PDE11AQ9HCR9 933 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 RBAKQ9NYW8 714 aaPredicted RBP18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 PCOLCE2Q9UKZ9 415 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.52
UBE2D4-209ENST00000454428 E2F8A0AVK6 867 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 F8VP50 259 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 ABL1P00519 1130 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 PDGFRBP09619 1106 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 MBL2P11226 248 aaPredicted RBP18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 NTSR1P30989 418 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 RBP5P82980 135 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 GAD2Q05329 585 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 C10orf76Q5T2E6 689 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 EGFLAMQ63HQ2 1017 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 DPH6Q7L8W6 267 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 TRMT11Q7Z4G4 463 aaKnown RBP18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 TERB1Q8NA31 727 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 CRELD1Q96HD1 420 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 C8orf48Q96LL4 319 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 TOR4AQ9NXH8 423 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 CACNA2D2Q9NY47 1150 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 TBC1D14Q9P2M4 693 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 DKK4Q9UBT3 224 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 CFAP46Q8IYW2 2715 aa18.32■□□□□ 0.52
UBE2D4-209ENST00000454428 GOLGA8IPA6NC78 632 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 GOLGA8JA6NMD2 632 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 DKK1O94907 266 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 WARSP23381 471 aaKnown RBP18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 ANXA13P27216 316 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 MAOBP27338 520 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 UBA7P41226 1012 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 MARCH9Q86YJ5 346 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 BBS7Q8IWZ6 715 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 OR5B17Q8NGF7 314 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 MYCBPAPQ8TBZ2 947 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 IPO4Q8TEX9 1081 aaKnown RBP18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 LARP4BQ92615 738 aaKnown RBP18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 IL21RQ9HBE5 538 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 DEC1Q9P2X7 70 aa18.31■□□□□ 0.52
UBE2D4-209ENST00000454428 TENM4Q6N022 2769 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 TRIM66O15016 1216 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 COCHO43405 550 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 ZNF217O75362 1048 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 CASP5P51878 434 aa18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
UBE2D4-209ENST00000454428 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms