RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TELO2Q9Y4R8 837 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 NRCAMQ92823 1304 aa11.03□□□□□ -0.64
TOP3B-210ENST00000444502 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 FKTNO75072 461 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 ZSCAN5DPP0CG00 497 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 SCNN1GP51170 649 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 PRKCZQ05513 592 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 HIF1AQ16665 826 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 FAXCQ5TGI0 409 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 HEATR6Q6AI08 1181 aaKnown RBP11.02□□□□□ -0.64
TOP3B-210ENST00000444502 LRRC34Q8IZ02 419 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 TTC13Q8NBP0 860 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 PPFIBP2Q8ND30 876 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.64
TOP3B-210ENST00000444502 SAE1Q9UBE0 346 aaPredicted RBP11.02□□□□□ -0.64
TOP3B-210ENST00000444502 ABCA3Q99758 1704 aa11.02□□□□□ -0.64
TOP3B-210ENST00000444502 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 QPCTQ16769 361 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 PID1Q7Z2X4 250 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 TJP2Q9UDY2 1190 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 DCTN4Q9UJW0 460 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 NAV1Q8NEY1 1877 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 LTBP3Q9NS15 1303 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CCT8L1PA6NM43 557 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 TREHO43280 583 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CDH16O75309 829 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 STAMBPO95630 424 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CD52P31358 61 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 NDST1P52848 882 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 DYNC1I2Q13409 638 aaKnown RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 NFIL3Q16649 462 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 ANKRD20A2Q5SQ80 823 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 ANKRD20A1Q5TYW2 823 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 BRSK2Q8IWQ3 736 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 C12orf56Q8IXR9 622 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 FAM71DQ8N9W8 422 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 SPATA18Q8TC71 538 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CDKL2Q92772 493 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 GORASP1Q9BQQ3 440 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 ABCF3Q9NUQ8 709 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CST3P01034 146 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 NFICP08651 508 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 KLC1Q07866 573 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 FSTL1Q12841 308 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 WDR49Q8IV35 697 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CCT6BQ92526 530 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 MCUR1Q96AQ8 359 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 DCLK3Q9C098 648 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-210ENST00000444502 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.65
TOP3B-210ENST00000444502 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 CEP290O15078 2479 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 ADGRA3Q8IWK6 1321 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 DPPA5A6NC42 116 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 CHRNB2P17787 502 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MAP3K7CLP57077 242 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 TPI1P60174 286 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PTPN11Q06124 597 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PDE1CQ14123 709 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-210ENST00000444502 SPARCL1Q14515 664 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MDH1BQ5I0G3 518 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 VPS52Q8N1B4 723 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PABPC5Q96DU9 382 aaKnown RBP11.01□□□□□ -0.65
TOP3B-210ENST00000444502 SH3GL2Q99962 352 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 CDT1Q9H211 546 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 TRABDQ9H4I3 376 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 LMCD1Q9NZU5 365 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 KPNA6O60684 536 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MAFO75444 373 aaPredicted RBP11.01□□□□□ -0.65
TOP3B-210ENST00000444502 CYP1A2P05177 515 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 GRK4P32298 578 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 TAS2R40P59535 323 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 ROR1Q01973 937 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 MAP7D1Q3KQU3 841 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 CTXN3Q4LDR2 81 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 DUPD1Q68J44 220 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PCGF5Q86SE9 256 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 ACTL9Q8TC94 416 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 FSD1LQ9BXM9 530 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 RAB6BQ9NRW1 208 aa11.01□□□□□ -0.65
TOP3B-210ENST00000444502 DDX43Q9NXZ2 648 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms