RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 EXD1Q8NHP7 514 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 HERVK_113Q902F9 699 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 FAM149B1Q96BN6 582 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 CFAP57Q96MR6 1250 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 ZBED2Q9BTP6 218 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.18■□□□□ 0.98
VRK2-207ENST00000440705 INSL6Q9Y581 213 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 BACE2Q9Y5Z0 518 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 PTPRSQ13332 1948 aa21.18■□□□□ 0.98
VRK2-207ENST00000440705 TRIM66O15016 1216 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 ZBED1O96006 694 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 PPM1AP35813 382 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 CETN2P41208 172 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 EPHB4P54760 987 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 DAOAP59103 153 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 GPRIN1Q7Z2K8 1008 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 RCOR2Q8IZ40 523 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 ARFGAP1Q8N6T3 406 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 C2orf15Q8WU43 125 aaKnown RBP21.17■□□□□ 0.98
VRK2-207ENST00000440705 RIN2Q8WYP3 895 aaPredicted RBP21.17■□□□□ 0.98
VRK2-207ENST00000440705 PIK3R5Q8WYR1 880 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 IRGQQ8WZA9 623 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 DDX23Q9BUQ8 820 aaKnown RBP21.17■□□□□ 0.98
VRK2-207ENST00000440705 MTRRQ9UBK8 725 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 STK39Q9UEW8 545 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 PCDHB12Q9Y5F1 795 aa21.17■□□□□ 0.98
VRK2-207ENST00000440705 KRIT1O00522 736 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 SYN1P17600 705 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 MATKP42679 507 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 RABGGTBP53611 331 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 ARPP19P56211 112 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 SLC25A11Q02978 314 aaKnown RBP21.16■□□□□ 0.98
VRK2-207ENST00000440705 C2orf54Q08AI8 447 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 ODF2Q5BJF6 829 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 ZFYVE27Q5T4F4 411 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 PM20D1Q6GTS8 502 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 DDX53Q86TM3 631 aaKnown RBP21.16■□□□□ 0.98
VRK2-207ENST00000440705 MMGT1Q8N4V1 131 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 FIBCD1Q8N539 461 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 NOA1Q8NC60 698 aaKnown RBP21.16■□□□□ 0.98
VRK2-207ENST00000440705 PHOSPHO2Q8TCD6 241 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 SPPL2BQ8TCT7 592 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 C8orf48Q96LL4 319 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 SLC9A7Q96T83 725 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 LBHD1Q9BQE6 289 aaPredicted RBP21.16■□□□□ 0.98
VRK2-207ENST00000440705 VN1R3Q9BXE9 311 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 MTIF3Q9H2K0 278 aaKnown RBP21.16■□□□□ 0.98
VRK2-207ENST00000440705 POPDC2Q9HBU9 364 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 SLC4A7Q9Y6M7 1214 aa21.16■□□□□ 0.98
VRK2-207ENST00000440705 CCDC188H7C350 402 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 DYNC1I1O14576 645 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 DAB1O75553 588 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 USP17L7P0C7H9 530 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 TCF4P15884 667 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 MIPP30301 263 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 GJC1P36383 396 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 ATP11AP98196 1134 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 SMC1AQ14683 1233 aaKnown RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 NAA30Q147X3 362 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 PSMD5Q16401 504 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 C15orf59Q2T9L4 293 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 SLC8B1Q6J4K2 584 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 PRSS55Q6UWB4 352 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 SCN4BQ8IWT1 228 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 FBXO22Q8NEZ5 403 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 NDRG1Q92597 394 aaKnown RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 RBM41Q96IZ5 413 aaKnown RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 PGLYRP2Q96PD5 576 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 RBM12Q9NTZ6 932 aaKnown RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 CXXC1Q9P0U4 656 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 USP18Q9UMW8 372 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 USP3Q9Y6I4 520 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 NOS2P35228 1153 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 CDO1Q16878 200 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 CCDC70Q6NSX1 233 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 AADACL2Q6P093 401 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 RSPO2Q6UXX9 243 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 SLC13A5Q86YT5 568 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 DEFB106AQ8N104 65 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 ATAD1Q8NBU5 361 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 FAM172AQ8WUF8 416 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 CENPIQ92674 756 aaPredicted RBP21.15■□□□□ 0.98
VRK2-207ENST00000440705 SLC2A13Q96QE2 648 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 TRIM62Q9BVG3 475 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 HERC2P3Q9BVR0 1158 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 CDY1Q9Y6F8 540 aa21.15■□□□□ 0.98
VRK2-207ENST00000440705 PATJQ8NI35 1801 aa21.14■□□□□ 0.98
VRK2-207ENST00000440705 GOLGA6L10A0A0M3HER8 536 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 MTMR11A4FU01 709 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 TNFRSF10BO14763 440 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 PRPSAP2O60256 369 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 TRUB2O95900 331 aaKnown RBP21.14■□□□□ 0.97
VRK2-207ENST00000440705 GLUD2P49448 558 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 COPS2P61201 443 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 DSG1Q02413 1049 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 KRT17Q04695 432 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 ELF2Q15723 593 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 SLC25A52Q3SY17 297 aa21.14■□□□□ 0.97
VRK2-207ENST00000440705 SH3PXD2AQ5TCZ1 1133 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms