RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RELL1Q8IUW5 271 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 ANKRD42Q8N9B4 389 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 OR6B3Q8NGW1 331 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 MAGEC3Q8TD91 643 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 MRRFQ96E11 262 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 SH3GL3Q99963 347 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 CNPY3Q9BT09 278 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 NGRNQ9NPE2 291 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 SPATS2LQ9NUQ6 558 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 MYL3P08590 195 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 ADORA2BP29275 332 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 DPYSL3Q14195 570 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 EFTUD2Q15029 972 aaKnown RBP eCLIP15.87■□□□□ 0.137e-12■■■■■ 65.8
SCAMP4-202ENST00000409472 TMED2Q15363 201 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 SNCBQ16143 134 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 FNBP1LQ5T0N5 605 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 C6orf89Q6UWU4 347 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 NT5DC4Q86YG4 428 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 SRRM1Q8IYB3 904 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 ARMC2Q8NEN0 867 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 CENPTQ96BT3 561 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 SEC16BQ96JE7 1060 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 CNTN3Q9P232 1028 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 SMIM35A0A1B0GVV1 85 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 FKBP1BP68106 108 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 PDIA2Q13087 525 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 MORF4L2Q15014 288 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 SCYL2Q6P3W7 929 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 C7orf31Q8N865 590 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 ASNSD1Q9NWL6 643 aa15.87■□□□□ 0.13
SCAMP4-202ENST00000409472 CLUHO75153 1309 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SMIM28A0A1B0GU29 152 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 GOLGA6L7A0A1B0GV03 622 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 MEIS3P2A8K0S8 358 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 APOC4-APOC2K7ER74 178 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 APOC2P02655 101 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 IL4RP24394 825 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 PCK1P35558 622 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 PSEN2P49810 448 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 HUNKP57058 714 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 ACTN3Q08043 901 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 GRIK3Q13003 919 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 CPLX4Q7Z7G2 160 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SPATA18Q8TC71 538 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 FAM172AQ8WUF8 416 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC35F5Q8WV83 523 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 PLEKHA5Q9HAU0 1116 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 A8MXQ7 604 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 TCEA3O75764 348 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 RASSF9O75901 435 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 ENDOD1O94919 500 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 RBP3P10745 1247 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC8A3P57103 927 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 GPX6P59796 221 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 C1orf228Q6PIY5 440 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 TAOK1Q7L7X3 1001 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 CROCCP2Q86T23 111 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 CCDC33Q8N5R6 958 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 BEST2Q8NFU1 509 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 GDAP1Q8TB36 358 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 CCHCR1Q8TD31 782 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC4A5Q9BY07 1137 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 LGALS13Q9UHV8 139 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 SHOC2Q9UQ13 582 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 EFR3BQ9Y2G0 817 aa15.86■□□□□ 0.13
SCAMP4-202ENST00000409472 EXOC1LA0A1B0GW35 172 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 ANKRD33BA6NCL7 494 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 POC1B-GALNT4F8VUJ3 575 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 HAS3O00219 553 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 BRAFP15056 766 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 TKTP29401 623 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 SLC8A1P32418 973 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 NAT8LQ8N9F0 302 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 NDRG1Q92597 394 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 STMN4Q9H169 189 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 VPS37BQ9H9H4 285 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 KCNK9Q9NPC2 374 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 GGA2Q9UJY4 613 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 DERAQ9Y315 318 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 HDAC4P56524 1084 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 FBXO47Q5MNV8 452 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 RNF187Q5TA31 235 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 PQLC3Q8N755 202 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 LRRC52Q8N7C0 313 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 SMG8Q8ND04 991 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 RSAD2Q8WXG1 361 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 ZFP42Q96MM3 310 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 SNRNP25Q9BV90 132 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 OSBPL7Q9BZF2 842 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 UBN1Q9NPG3 1134 aa15.85■□□□□ 0.13
SCAMP4-202ENST00000409472 PIRO00625 290 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 PRPSAP2O60256 369 aa15.84■□□□□ 0.13
SCAMP4-202ENST00000409472 CDH16O75309 829 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms