RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MRPL45Q9BRJ2 306 aaKnown RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 ZWINTO95229 277 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 SETSIPP0DME0 302 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 KRT4P19013 534 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 EPHX2P34913 555 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 MSH2P43246 934 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 NRLP54845 237 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 ATP11AP98196 1134 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 BOLA3Q53S33 107 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 ZC3H12AQ5D1E8 599 aaKnown RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 SWT1Q5T5J6 900 aaKnown RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 FITM2Q8N6M3 262 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 LRRC8CQ8TDW0 803 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 SLC10A4Q96EP9 437 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
NUP50-203ENST00000407019 GRID1Q9ULK0 1009 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 CHMP2BQ9UQN3 213 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 SNX9Q9Y5X1 595 aa17.57■□□□□ 0.4
NUP50-203ENST00000407019 PDHXO00330 501 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 DESP17661 470 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SDC4P31431 198 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 GTF2A1P52655 376 aaPredicted RBP17.56■□□□□ 0.4
NUP50-203ENST00000407019 MGAT5Q09328 741 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 MTM1Q13496 603 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 KCNJ11Q14654 390 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 PKDCCQ504Y2 493 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 PMF1Q6P1K2 205 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SCYL2Q6P3W7 929 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 TBC1D1Q86TI0 1168 aaPredicted RBP17.56■□□□□ 0.4
NUP50-203ENST00000407019 ACOT1Q86TX2 421 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 TTC30AQ86WT1 665 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 FAM172AQ8WUF8 416 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SPOCK2Q92563 424 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 USP6NLQ92738 828 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 CD248Q9HCU0 757 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 VGLL3A8MV65 326 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 APOL1O14791 398 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 CHADO15335 359 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 STRNO43815 780 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 MMP3P08254 477 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 TGM2P21980 687 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 CCDC15Q0P6D6 951 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 PLD5Q8N7P1 536 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 MZB1Q8WU39 189 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 DCAKDQ8WVC6 231 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 FAF2Q96CS3 445 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SNX27Q96L92 541 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 TBCBQ99426 244 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SLC4A5Q9BY07 1137 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 FAM49BQ9NUQ9 324 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 GPATCH2LQ9NWQ4 482 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 PAK5Q9P286 719 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 HESX1Q9UBX0 185 aa17.56■□□□□ 0.4
NUP50-203ENST00000407019 CFAP69A5D8W1 941 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 EDF1O60869 148 aaKnown RBP17.55■□□□□ 0.4
NUP50-203ENST00000407019 HOXD8P13378 290 aaPredicted RBP17.55■□□□□ 0.4
NUP50-203ENST00000407019 ELK3P41970 407 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 SNX16P57768 344 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 KIZQ2M2Z5 673 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 TMEM110Q86TL2 294 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 L3MBTL3Q96JM7 780 aaPredicted RBP17.55■□□□□ 0.4
NUP50-203ENST00000407019 CYTH2Q99418 400 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 PCDH18Q9HCL0 1135 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 CITO14578 2027 aa17.55■□□□□ 0.4
NUP50-203ENST00000407019 PPEF2O14830 753 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 NQO1P15559 274 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 SMPD1P17405 629 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 YARSP54577 528 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 DUSP28Q4G0W2 176 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SLC27A1Q6PCB7 646 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 VSIG1Q86XK7 387 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 LRRC52Q8N7C0 313 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 BEST2Q8NFU1 509 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SLC35F5Q8WV83 523 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 ALKBH8Q96BT7 664 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 RTP4Q96DX8 246 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 ZMAT2Q96NC0 199 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 NCAPGQ9BPX3 1015 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SNRNP25Q9BV90 132 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 USP29Q9HBJ7 922 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SLCO1B3Q9NPD5 702 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 TUBGCP4Q9UGJ1 667 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 KCNN4O15554 427 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SPAG6O75602 509 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms