RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 SLC26A9Q7LBE3 791 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 MAP7D3Q8IWC1 876 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 SCUBE3Q8IX30 993 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 SMG8Q8ND04 991 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 SEC16BQ96JE7 1060 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 APBA2Q99767 749 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PRMT1Q99873 361 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 APOL6Q9BWW8 343 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 AP5M1Q9H0R1 490 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 C10orf88Q9H8K7 445 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PPCSQ9HAB8 311 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 C17orf102A2RUQ5 167 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 HCRTO43612 131 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 MYL3P08590 195 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 LMO2P25791 158 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 GNL1P36915 607 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 RGS2P41220 211 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 BCAT1P54687 386 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 HDAC4P56524 1084 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 ATP11AP98196 1134 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 BEX3Q00994 111 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PDIA2Q13087 525 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 CBLBQ13191 982 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 CDO1Q16878 200 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 ANKRD22Q5VYY1 191 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 PIGWQ7Z7B1 504 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 TADA2BQ86TJ2 420 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 C10orf67Q8IYJ2 551 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 FAM172AQ8WUF8 416 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 CENPIQ92674 756 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 P3H4Q92791 437 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 FAF2Q96CS3 445 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 LPIN3Q9BQK8 851 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 MAK16Q9BXY0 300 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 B3GNT5Q9BYG0 378 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 IPPQ9Y573 584 aa9.45□□□□□ -0.9
TDP1-202ENST00000393452 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.45□□□□□ -0.9
TDP1-202ENST00000393452 EXOC1LA0A1B0GW35 172 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 GNAT1P11488 350 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 CYP2B6P20813 491 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TAF6P49848 677 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 NR1H3Q13133 447 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 MPP2Q14168 576 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 FSCN1Q16658 493 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 SLC9A4Q6AI14 798 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ZBED8Q8IZ13 594 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 CACNA2D3Q8IZS8 1091 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 PQLC3Q8N755 202 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 PLD5Q8N7P1 536 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ARRDC4Q8NCT1 418 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 APPL2Q8NEU8 664 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 SOCS4Q8WXH5 440 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 RTP4Q96DX8 246 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ZNF670Q9BS34 389 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 SNRNP25Q9BV90 132 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 USP29Q9HBJ7 922 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 PCDH18Q9HCL0 1135 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 NGRNQ9NPE2 291 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 FETUBQ9UGM5 382 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 GTF2IRD1Q9UHL9 959 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 CLUHO75153 1309 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 FOXO6A8MYZ6 492 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TMEM63AO94886 807 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 PDGFRBP09619 1106 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 FAM163BP0C2L3 166 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 CCDC130P13994 396 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 BRAFP15056 766 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TGM2P21980 687 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 LRPAP1P30533 357 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 RDXP35241 583 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 ACADSBP45954 432 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ARL4CP56559 192 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 GPX6P59796 221 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 LILRA4P59901 499 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ROR1Q01973 937 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 GAD2Q05329 585 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 IFT88Q13099 833 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 SV2CQ496J9 727 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ANKRD20A8PQ5CZ79 823 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 FNBP1LQ5T0N5 605 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TAF2Q6P1X5 1199 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 NPNTQ6UXI9 565 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TRABD2AQ86V40 505 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 LRRC34Q8IZ02 419 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 HSFY1Q96LI6 401 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 WDR83Q9BRX9 315 aaKnown RBP9.44□□□□□ -0.9
TDP1-202ENST00000393452 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 RASSF4Q9H2L5 321 aa9.44□□□□□ -0.9
TDP1-202ENST00000393452 UBN1Q9NPG3 1134 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms