RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF677Q86XU0 584 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 IL17RAQ96F46 866 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 CAAP1Q9H8G2 361 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF23P17027 643 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 VBP1P61758 197 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 PLA2G4FQ68DD2 849 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 PIK3C3Q8NEB9 887 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 ZNF624Q9P2J8 865 aaPredicted RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 SH3BP1Q9Y3L3 701 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 ERBB3P21860 1342 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 GYS2P54840 703 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 MROH7-TTC4A0A0A0MT08 1334 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 ZCCHC7Q8N3Z6 543 aaKnown RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 CENPIQ92674 756 aaPredicted RBP15.21■□□□□ 0.03
CCDC50-201ENST00000392455 AASDHPPTQ9NRN7 309 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 DLGAP2Q9P1A6 1054 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 ADGRA2Q96PE1 1338 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 COL15A1P39059 1388 aa15.21■□□□□ 0.03
CCDC50-201ENST00000392455 MYL12BO14950 172 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 NCK2O43639 380 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 PAX3P23760 479 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 NAA20P61599 178 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 COBLL1Q53SF7 1204 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 OXER1Q8TDS5 423 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 MANSC1Q9H8J5 431 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 MIEF1Q9NQG6 463 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 ERVK-7P63135 1459 aa15.21■□□□□ 0.02
CCDC50-201ENST00000392455 GHRP10912 638 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF846Q147U1 533 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 TXNRD1Q16881 649 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF57Q68EA5 555 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 BICRALQ6AI39 1079 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 TYW3Q6IPR3 259 aaKnown RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 RDM1Q8NG50 284 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 GTF3C2Q8WUA4 911 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 CCT8L2Q96SF2 557 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 MMADHCQ9H3L0 296 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 AAASQ9NRG9 546 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 P4HBP07237 508 aaKnown RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 PGBD3Q8N328 593 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF248Q8NDW4 579 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 RHBDL2Q9NX52 303 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 CCDC182A6NF36 153 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ULK3Q6PHR2 472 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 GANQ9H2C0 597 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 RSL24D1Q9UHA3 163 aaKnown RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ACTN3Q08043 901 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 TOB2Q14106 344 aaPredicted RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 MFSD4BQ5TF39 518 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 C1QTNF1Q9BXJ1 281 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 METTL21EPA6NDL7 271 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 BTN3A3O00478 584 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 ARID5BQ14865 1188 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 DGKKQ5KSL6 1271 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 HS6ST3Q8IZP7 471 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 UGT2B28Q9BY64 529 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 NRDE2Q9H7Z3 1164 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
CCDC50-201ENST00000392455 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 CCT8L1PA6NM43 557 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 GRM4Q14833 912 aa15.2■□□□□ 0.02
CCDC50-201ENST00000392455 GEMIN4P57678 1058 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 CENPCQ03188 943 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 CHPFQ8IZ52 775 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 KPNA6O60684 536 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 CALB2P22676 271 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 SPP2Q13103 211 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 PTK7Q13308 1070 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 ACOT12Q8WYK0 555 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 RNPC3Q96LT9 517 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 WBP11Q9Y2W2 641 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 AAR2Q9Y312 384 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 TRAF3Q13114 568 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 MAGEB10Q96LZ2 347 aaPredicted RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 PRDM8Q9NQV8 689 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 DYRK1BQ9Y463 629 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 NCAM1P13591 858 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 SULT1E1P49888 294 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 PSMC5P62195 406 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 TAF13Q15543 124 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 ENGASEQ8NFI3 743 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 OR6J1Q8NGC5 347 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 DGCR14Q96DF8 476 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 AGO2Q9UKV8 859 aaKnown RBP15.19■□□□□ 0.02
CCDC50-201ENST00000392455 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 CARNS1A5YM72 827 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 ENO4A6NNW6 628 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 VPS26AO75436 327 aa15.19■□□□□ 0.02
CCDC50-201ENST00000392455 AP1G2O75843 785 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms