RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LRRN4Q8WUT4 740 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 TUT1Q9H6E5 874 aaKnown RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 CDH16O75309 829 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 HPCAP84074 193 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 SCUBE3Q8IX30 993 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 CALML6Q8TD86 181 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 KRT35Q92764 455 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 AP3B1O00203 1094 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 MICAL2O94851 1124 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 STAU1O95793 577 aaKnown RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 VDRP11473 427 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 IMPDH2P12268 514 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 RHOAP61586 193 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 PPATQ06203 517 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 DOK6Q6PKX4 331 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 ZNF571Q7Z3V5 609 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 TMC2Q8TDI7 906 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 RXFP2Q8WXD0 754 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 TDRKHQ9Y2W6 561 aaKnown RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 MAP3K13O43283 966 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 FNTAP49354 379 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 TRADDQ15628 312 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 C16orf89Q6UX73 402 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 PHACTR4Q8IZ21 702 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 LPCAT1Q8NF37 534 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 COPS5Q92905 334 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 MTFMTQ96DP5 389 aaKnown RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 THUMPD3Q9BV44 507 aaKnown RBP17.74■□□□□ 0.43
MCF2L-203ENST00000375604 ATXN3LQ9H3M9 355 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 VWA5AO00534 786 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 WNT10BO00744 389 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 JCHAINP01591 159 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 ALDH2P05091 517 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 ACADMP11310 421 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 NDST1P52848 882 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 EPHB3P54753 998 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 PKN1Q16512 942 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 MTFR1LQ9H019 292 aa17.74■□□□□ 0.43
MCF2L-203ENST00000375604 SMNDC1O75940 238 aaKnown RBP eCLIP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 STARD3Q14849 445 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 POU6F1Q14863 301 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 SENP6Q9GZR1 1112 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 MROH8Q9H579 483 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 GRID1Q9ULK0 1009 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 MLNP12872 115 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ZNF720Q7Z2F6 126 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 GRAMD1AQ96CP6 724 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 LRRC23Q53EV4 343 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 TFDP3Q5H9I0 405 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ARID3BQ8IVW6 561 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 SYTL2Q9HCH5 934 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ZNF229Q9UJW7 825 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 MOXD2PA6NHM9 499 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ABCB1P08183 1280 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 CSHL1Q14406 222 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ALFQ53S48 1182 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 LRIG3Q6UXM1 1119 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ADCK1Q86TW2 530 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ISCUQ9H1K1 167 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 H2AFY2Q9P0M6 372 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 GTF2A1LQ9UNN4 478 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 CFAP99D6REC4 459 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 ALOX15P16050 662 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 STRA8Q7Z7C7 330 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 OOSP2Q86WS3 158 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 TUBGCP3Q96CW5 907 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 LACTBL1A8MY62 500 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 CYP2F1P24903 491 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 GEMP55040 296 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 MOB2Q70IA6 237 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 USE1Q9NZ43 259 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
MCF2L-203ENST00000375604 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-203ENST00000375604 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TNS2Q63HR2 1409 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TCRBV5S4A2TA0A5A2 114 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ANXA9O76027 345 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 SLC39A12Q504Y0 691 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 IYDQ6PHW0 289 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 TPGS1Q6ZTW0 290 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PALB2Q86YC2 1186 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PXDNQ92626 1479 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 DSG3P32926 999 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PKD2L2Q9NZM6 624 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 EIF3HO15372 352 aaKnown RBP eCLIP17.72■□□□□ 0.438e-7■■□□□ 12.1
MCF2L-203ENST00000375604 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 KPNA1P52294 538 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ZC3H15Q8WU90 426 aaKnown RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 SEPT8Q92599 483 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PLEKHA8Q96JA3 519 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 SNX8Q9Y5X2 465 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 ERI2A8K979 691 aaKnown RBP17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PSTPIP1O43586 416 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 PLD1Q13393 1074 aa17.72■□□□□ 0.43
MCF2L-203ENST00000375604 BFSP2Q13515 415 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms