RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RIPK1Q13546 671 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 SEPT7Q16181 437 aaKnown RBP18.86■□□□□ 0.61
CD40-201ENST00000372276 GOLGA7BQ2TAP0 167 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 PKDCCQ504Y2 493 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 MAP1SQ66K74 1059 aaPredicted RBP18.86■□□□□ 0.61
CD40-201ENST00000372276 FAM183BPQ6ZVS7 135 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 MOB2Q70IA6 237 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 ANKRD23Q86SG2 305 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 UBA3Q8TBC4 463 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 LRRC8CQ8TDW0 803 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 LRRC39Q96DD0 335 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 ZNF670Q9BS34 389 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.86■□□□□ 0.61
CD40-201ENST00000372276 IKBKGQ9Y6K9 419 aa18.86■□□□□ 0.61
CD40-201ENST00000372276 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 E5RJQ4 531 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 FAM163BP0C2L3 166 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 CA4P22748 312 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 SLC8A1P32418 973 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 PTPN9P43378 593 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 GPX6P59796 221 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 BNIP1Q12981 228 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 SETDB1Q15047 1291 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 PKN2Q16513 984 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 NOTUMQ6P988 496 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 UNC45BQ8IWX7 931 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 FAM71DQ8N9W8 422 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 ZNF398Q8TD17 642 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.85■□□□□ 0.61
CD40-201ENST00000372276 UBQLN1Q9UMX0 589 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 H7C0C1 242 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 PDHXO00330 501 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 TRDMT1O14717 391 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 TYROBPO43914 113 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 MGRN1O60291 552 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 MMP3P08254 477 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 MAGEA6P43360 314 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 ATP5OP48047 213 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 NR2C2P49116 596 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 WDR4P57081 412 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 FASTKD3Q14CZ7 662 aaKnown RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 ZBTB6Q15916 424 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 LGSNQ5TDP6 509 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 DPP9Q86TI2 863 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 CDKL3Q8IVW4 592 aaPredicted RBP18.85■□□□□ 0.61
CD40-201ENST00000372276 FBXO36Q8NEA4 188 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 FBF1Q8TES7 1133 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 SNX27Q96L92 541 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 KLC2Q9H0B6 622 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 USH1CQ9Y6N9 552 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 CLUHO75153 1309 aa18.85■□□□□ 0.61
CD40-201ENST00000372276 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 DCTN3O75935 186 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 FAM155BO75949 473 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
CD40-201ENST00000372276 CD48P09326 243 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 ADCYAP1R1P41586 468 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 GDF10P55107 478 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 BCAR1P56945 870 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 BASP1P80723 227 aaKnown RBP18.84■□□□□ 0.61
CD40-201ENST00000372276 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 FNBP1LQ5T0N5 605 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 SLC9A4Q6AI14 798 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 OLFML1Q6UWY5 402 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 BZW1Q7L1Q6 419 aaKnown RBP18.84■□□□□ 0.61
CD40-201ENST00000372276 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 SLC35F5Q8WV83 523 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 FAF2Q96CS3 445 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 ZNF560Q96MR9 790 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 TACO1Q9BSH4 297 aaKnown RBP18.84■□□□□ 0.61
CD40-201ENST00000372276 VPS11Q9H270 941 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 SAE1Q9UBE0 346 aaPredicted RBP18.84■□□□□ 0.61
CD40-201ENST00000372276 NRCAMQ92823 1304 aa18.84■□□□□ 0.61
CD40-201ENST00000372276 ATP2C2O75185 946 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 PFKMP08237 780 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 ZNF286BP0CG31 522 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 GJA5P36382 358 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 FKBP1BP68106 108 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 ORC1Q13415 861 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 GRB14Q14449 540 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 KCNJ11Q14654 390 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 BBS9Q3SYG4 887 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 MARCH8Q5T0T0 291 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 CATSPER4Q7RTX7 472 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 PNMA8AQ86V59 439 aaPredicted RBP18.83■□□□□ 0.61
CD40-201ENST00000372276 PLD5Q8N7P1 536 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 MCUQ8NE86 351 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 HSFY1Q96LI6 401 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 PAFAH2Q99487 392 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 PAIP2Q9BPZ3 127 aaKnown RBP18.83■□□□□ 0.61
CD40-201ENST00000372276 ADAMTS10Q9H324 1103 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 TXLNGQ9NUQ3 528 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 CNTN3Q9P232 1028 aa18.83■□□□□ 0.61
CD40-201ENST00000372276 NPTXRO95502 500 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 ALADP13716 330 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 FOXN2P32314 431 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 RPL34P49207 117 aaKnown RBP18.82■□□□□ 0.6
CD40-201ENST00000372276 BCAT1P54687 386 aa18.82■□□□□ 0.6
CD40-201ENST00000372276 FYB2Q5VWT5 728 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms