RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CRLS1Q9UJA2 301 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CCDC195A0A1B0GUA6 201 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ADM5C9JUS6 153 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SLCO1B7G3V0H7 640 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PSMD10O75832 226 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SYF2O95926 243 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CKMP06732 381 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CHN1P15882 459 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RAG1P15918 1043 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CDH2P19022 906 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TKTL1P51854 596 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 KBTBD12Q3ZCT8 623 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 REXO1L1PQ8IX06 675 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PGBD3Q8N328 593 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TRIML2Q8N7C3 387 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ZNF606Q8WXB4 792 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 L2HGDHQ9H9P8 463 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SYTL2Q9HCH5 934 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CD274Q9NZQ7 290 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SLC24A2Q9UI40 661 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CHMP2BQ9UQN3 213 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TNFSF13BQ9Y275 285 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ANXA11P50995 505 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PRKAA2P54646 552 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MAP3K7CLP57077 242 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PSMC6P62333 389 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ZRANB3Q5FWF4 1079 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SPDYCQ5MJ68 293 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SH3RF1Q7Z6J0 888 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PATL1Q86TB9 770 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MCOLN2Q8IZK6 566 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 AGGF1Q8N302 714 aaeCLIP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ECT2Q9H8V3 914 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ETNK1Q9HBU6 452 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SELENONQ9NZV5 590 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TRIM10Q9UDY6 481 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 FAF1Q9UNN5 650 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SNX5Q9Y5X3 404 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 C2CD2LO14523 706 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 XYLBO75191 536 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PARNO95453 639 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RRM1P23921 792 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RPL9P32969 192 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 AVPR1AP37288 418 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 E2F4Q16254 413 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MDH1BQ5I0G3 518 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SPDYAQ5MJ70 313 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 FAM117BQ6P1L5 589 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 USP33Q8TEY7 942 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 C18orf25Q96B23 403 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ZNF669Q96BR6 464 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PCDH9Q9HC56 1237 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TSPAN16Q9UKR8 245 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 LRRC10BA6NIK2 292 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SPATA31C2B4DYI2 1134 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PJA2O43164 708 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RHOBTB1O94844 696 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 LGALS2P05162 132 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 HSPA1AP0DMV8 641 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 HSPA1BP0DMV9 641 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 NDST1P52848 882 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 YWHAZP63104 245 aaKnown RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SMARCB1Q12824 385 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MAP2K5Q13163 448 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 IKBKEQ14164 716 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 LONRF1Q17RB8 773 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MAP1SQ66K74 1059 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 OR9Q1Q8NGQ5 310 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RNF217Q8TC41 542 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 OSCP1Q8WVF1 389 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RXFP2Q8WXD0 754 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PRKD2Q9BZL6 878 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 SMYD3Q9H7B4 428 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 GIMAP4Q9NUV9 329 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 DERAQ9Y315 318 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RPS6KL1Q9Y6S9 549 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CCDC88AQ3V6T2 1871 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RNF103-CHMP3A0A140T963 221 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 HEATR9A2RTY3 570 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ATMINO43313 823 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 LYPLA2O95372 231 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 RHOCP08134 193 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 AMHR2Q16671 573 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 PKN3Q6P5Z2 889 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 CXorf38Q8TB03 319 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 ATXN7L3BQ96GX2 97 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 APBA2Q99767 749 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TRIM4Q9C037 500 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 COG4Q9H9E3 785 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TMEM39AQ9NV64 488 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MEIS2O14770 477 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 TM9SF1O15321 606 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 EFCAB14O75071 495 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 VPS26AO75436 327 aa5.03□□□□□ -1.6
SCN3A-202ENST00000360093 MAFO75444 373 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-202ENST00000360093 UBA1P22314 1058 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms