RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 COPAP53621 1224 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 MAPK10P53779 464 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 ADRM1Q16186 407 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 DHDDSQ86SQ9 333 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 ZNF786Q8N393 782 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
NPHP3-201ENST00000337331 ANKEF1Q9NU02 776 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 DAPK2Q9UIK4 370 aa16.65■□□□□ 0.26
NPHP3-201ENST00000337331 FUT4P22083 530 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 STX3Q13277 289 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
NPHP3-201ENST00000337331 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 TMEM53Q6P2H8 277 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 TCP10LQ8TDR4 215 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 DKK3Q9UBP4 350 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 TBX20Q9UMR3 447 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 GMEB1Q9Y692 573 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 KLRC4O43908 158 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 ARP10275 920 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 GNAZP19086 355 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 PSMC6P62333 389 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 PTK7Q13308 1070 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 LSAMPQ13449 338 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 OR52E8Q6IFG1 317 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 ACAD10Q6JQN1 1059 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 KRT35Q92764 455 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 ATG4CQ96DT6 458 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 WHRNQ9P202 907 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 MATN2O00339 956 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 TLR2O60603 784 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 KRT8P05787 483 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 ENO3P13929 434 aaPredicted RBP16.64■□□□□ 0.25
NPHP3-201ENST00000337331 RBP5P82980 135 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 CDK16Q00536 496 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 CDC16Q13042 620 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 RINLQ6ZS11 566 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 LRRC71Q8N4P6 559 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 EFCAB3Q8N7B9 438 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 MMP19Q99542 508 aa16.64■□□□□ 0.25
NPHP3-201ENST00000337331 CSPG5O95196 566 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SREBF1P36956 1147 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SEZ6Q53EL9 994 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 HGSNATQ68CP4 663 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 ZNF280CQ8ND82 737 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 GSTCDQ8NEC7 633 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 PPP1R36Q96LQ0 422 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 COQ7Q99807 217 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 NIF3L1Q9GZT8 377 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 ZC4H2Q9NQZ6 224 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 ATAD3AQ9NVI7 634 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 C2CD2LO14523 706 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 PIAS1O75925 651 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 FOXN2P32314 431 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 NSUN2Q08J23 767 aaKnown RBP eCLIP16.63■□□□□ 0.25
NPHP3-201ENST00000337331 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 THEM5Q8N1Q8 247 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 CAPSLQ8WWF8 208 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 OCEL1Q9H607 264 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 FAM49BQ9NUQ9 324 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 JCADQ9P266 1359 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 CHKAP35790 457 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SLC25A3Q00325 362 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 FLOT2Q14254 428 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 VPS72Q15906 364 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 PRELID2Q8N945 189 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 MYH8P13535 1937 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 PDGFRBP09619 1106 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 CLCN2P51788 898 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 FOXD4Q12950 439 aaPredicted RBP16.63■□□□□ 0.25
NPHP3-201ENST00000337331 CHI3L2Q15782 390 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 ANO4Q32M45 955 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 C1QTNF12Q5T7M4 302 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 KDELC2Q7Z4H8 507 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 DEFB107AQ8IZN7 70 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 DQX1Q8TE96 717 aaKnown RBP16.63■□□□□ 0.25
NPHP3-201ENST00000337331 PACSIN3Q9UKS6 424 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 SOX13Q9UN79 622 aa16.63■□□□□ 0.25
NPHP3-201ENST00000337331 C2orf71A6NGG8 1288 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 SPTLC1O15269 473 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 EXTL3O43909 919 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 DAB1O75553 588 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 NELFEP18615 380 aaKnown RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 PPARGP37231 505 aaPredicted RBP16.62■□□□□ 0.25
NPHP3-201ENST00000337331 CENPCQ03188 943 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 PDK4Q16654 411 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 E2F7Q96AV8 911 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 MAGEB5Q9BZ81 275 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 MAFGO15525 162 aa16.62■□□□□ 0.25
NPHP3-201ENST00000337331 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms