RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OPALINQ96PE5 141 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ZSCAN5AQ9BUG6 496 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ARMCX3Q9UH62 379 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 FBXO2Q9UK22 296 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 MYO3AQ8NEV4 1616 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 A8MU76 341 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 RBAK-RBAKDNI3L0D1 243 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 PODXLO00592 558 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 FOXP2O15409 715 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TOM1O60784 492 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ADAMTS2O95450 1211 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 GH1P01241 217 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 TCIRG1Q13488 830 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TRIP13Q15645 432 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 C10orf62Q5T681 223 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 C12orf60Q5U649 245 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 PGM2L1Q6PCE3 622 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 SMYD4Q8IYR2 804 aaPredicted RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 ZNF34Q8IZ26 560 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 HM13Q8TCT9 377 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 KCTD4Q8WVF5 259 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 DCUN1D1Q96GG9 259 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 TUBGCP2Q9BSJ2 902 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 ALG1Q9BT22 464 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 HEMGNQ9BXL5 484 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 WDR12Q9GZL7 423 aaKnown RBP8.93□□□□□ -0.98
TDP1-201ENST00000335725 MAGEE1Q9HCI5 957 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 GMEB2Q9UKD1 530 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 SIK3Q9Y2K2 1263 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 BCL9LQ86UU0 1499 aa8.93□□□□□ -0.98
TDP1-201ENST00000335725 WNK3Q9BYP7 1800 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 J3QRK9 145 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 TTLL1O95922 423 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 ASS1P00966 412 aaKnown RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 NR4A2P43354 598 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SLC18A1P54219 525 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 TFDP1Q14186 410 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SELPLGQ14242 412 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 RILPL1Q5EBL4 403 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 OGFRL1Q5TC84 451 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 CENPUQ71F23 418 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 RASGEF1CQ8N431 466 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SLC26A7Q8TE54 656 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 FBXL8Q96CD0 374 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 NACC1Q96RE7 527 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 RMDN3Q96TC7 470 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 EDEM3Q9BZQ6 932 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SMYD3Q9H7B4 428 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 HMG20AQ9NP66 347 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 MRPL40Q9NQ50 206 aaKnown RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 HEY2Q9UBP5 337 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 MAPRE3Q9UPY8 281 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 RPTORQ8N122 1335 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 CRTAMO95727 393 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 POLR2MP0CAP2 368 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 CDH1P12830 882 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 GRK2P25098 689 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 ALDH1A3P47895 512 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 NKX2-5P52952 324 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 HIC1Q14526 733 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 ZNF354CQ86Y25 554 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SLC15A4Q8N697 577 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 TRIB2Q92519 343 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 ZUFSPQ96AP4 578 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 RPRD1AQ96P16 312 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 ZNF347Q96SE7 839 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 THTPAQ9BU02 230 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 FBXO40Q9UH90 709 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 MAU2Q9Y6X3 613 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 ZHX2Q9Y6X8 837 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 NCAPD2Q15021 1401 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 KPNA5O15131 536 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 GAS7O60861 476 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 PLEKP08567 350 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 ICAM2P13598 275 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 PSMC3P17980 439 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 DNAJB2P25686 324 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 PSMA4P25789 261 aaKnown RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 ARHGDIBP52566 201 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 POU6F2P78424 691 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 RELQ04864 619 aaPredicted RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 ENPEPQ07075 957 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 AP3B2Q13367 1082 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SEMA3AQ14563 771 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 KRT40Q6A162 431 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 IGFN1Q86VF2 1251 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 POU5F2Q8N7G0 328 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.92□□□□□ -0.98
TDP1-201ENST00000335725 DEPDC7Q96QD5 511 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 SLC29A1Q99808 456 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 BTBD2Q9BX70 525 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 NOL6Q9H6R4 1146 aaKnown RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 NTN4Q9HB63 628 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 TMEM9Q9P0T7 183 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms