RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CSTF3Q12996 717 aaKnown RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF512BQ96KM6 892 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 PLA2G6O60733 806 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ITGB6P18564 788 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 SERPINB5P36952 375 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 HALP42357 657 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NAMPTP43490 491 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NUDT2P50583 147 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 EDRF1Q3B7T1 1238 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 KLHDC7AQ5VTJ3 777 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CYP4F12Q9HCS2 524 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 PHF20L1A8MW92 1017 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CRTAMO95727 393 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 VDRP11473 427 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 LHX1P48742 406 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 SERPINB8P50452 374 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NT5DC3Q86UY8 548 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CD302Q8IX05 232 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 SPACA7Q96KW9 195 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ATP6V1C1P21283 382 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 VSNL1P62760 191 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 TRMT11Q7Z4G4 463 aaKnown RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 BBS2Q9BXC9 721 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 OGTO15294 1046 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 PYGMP11217 842 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 GSTA3Q16772 222 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CAMKK1Q8N5S9 505 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CASP10Q92851 521 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 NLNQ9BYT8 704 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-201ENST00000225964 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
COL1A1-201ENST00000225964 A0A1B0GW55 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ALBP02768 609 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 AMHP03971 560 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L2P0CJ85 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L3P0CJ86 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L4P0CJ87 422 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L5P0CJ88 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L6P0CJ89 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4L7P0CJ90 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 IGFBP4P22692 258 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 CPA2P48052 419 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 BCAT1P54687 386 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 FAM172AQ8WUF8 416 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 SENP2Q9HC62 589 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DUX4Q9UBX2 424 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 B2RBV5 119 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 RAG1P15918 1043 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 KLRC1P26715 233 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 GLRBP48167 497 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ITPK1Q13572 414 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 TOMM20Q15388 145 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 KLC4Q9NSK0 619 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
COL1A1-201ENST00000225964 AGPAT3Q9NRZ7 376 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 TRPC4Q9UBN4 977 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ALG6Q9Y672 507 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 LOC100653049A0A140TA62 436 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 SLC37A4O43826 429 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 KRT34O76011 436 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ACOX1Q15067 660 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 LUZP2Q86TE4 346 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 SETD3Q86TU7 594 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-201ENST00000225964 CNPY4Q8N129 248 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 E9PBE3 544 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 TK2O00142 265 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 SMAPO00193 183 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 KYNUQ16719 465 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 COMMD2Q86X83 199 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 ERP27Q96DN0 273 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 MRGBPQ9NV56 204 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 LRRC7Q96NW7 1537 aa13.67□□□□□ -0.22
COL1A1-201ENST00000225964 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ZW10O43264 779 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
COL1A1-201ENST00000225964 OSMRQ99650 979 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 CCT7Q99832 543 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 THAP2Q9H0W7 228 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 SNTG2Q9NY99 539 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 NCKAP1Q9Y2A7 1128 aa13.66□□□□□ -0.22
COL1A1-201ENST00000225964 ADGRB3O60242 1522 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms