RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W RPL18AP0CX49 186 aaKnown RBP2.21□□□□□ -2.06
NIP7YPL211W RPL18BP0CX50 186 aaKnown RBP2.21□□□□□ -2.06
NIP7YPL211W FUN14P18411 198 aa2.21□□□□□ -2.06
NIP7YPL211W MRPL44P19956 98 aa2.21□□□□□ -2.06
NIP7YPL211W YKL044WP36092 106 aa2.21□□□□□ -2.06
NIP7YPL211W YKR041WP36134 250 aa2.21□□□□□ -2.06
NIP7YPL211W PEX17P40155 199 aa2.21□□□□□ -2.06
NIP7YPL211W GAT4P40569 121 aa2.21□□□□□ -2.06
NIP7YPL211W CIN5P40917 295 aa2.21□□□□□ -2.06
NIP7YPL211W LSM8P47093 109 aaKnown RBP2.21□□□□□ -2.06
NIP7YPL211W YGL230CP53074 147 aa2.21□□□□□ -2.06
NIP7YPL211W CGR1P53188 120 aa2.21□□□□□ -2.06
NIP7YPL211W YDL157CQ12082 118 aa2.21□□□□□ -2.06
NIP7YPL211W YPL229WQ99395 206 aa2.21□□□□□ -2.06
NIP7YPL211W YDR034C-AP0C289 58 aa2.2□□□□□ -2.06
NIP7YPL211W MSL1P40567 111 aaPredicted RBP2.2□□□□□ -2.06
NIP7YPL211W SNA2P56508 79 aa2.2□□□□□ -2.06
NIP7YPL211W YDL241WQ07738 123 aa2.2□□□□□ -2.06
NIP7YPL211W NAT5Q08689 176 aa2.2□□□□□ -2.06
NIP7YPL211W YDR029WQ12111 104 aa2.2□□□□□ -2.06
NIP7YPL211W FYV7Q12247 151 aa2.2□□□□□ -2.06
NIP7YPL211W QCR8P08525 94 aa2.19□□□□□ -2.06
NIP7YPL211W YEL067CP39978 195 aa2.19□□□□□ -2.06
NIP7YPL211W VTC1P40046 129 aaRIP-Chip data2.19□□□□□ -2.06not detected
NIP7YPL211W YPL073CP40323 161 aa2.19□□□□□ -2.06
NIP7YPL211W LCL2Q08045 131 aa2.19□□□□□ -2.06
NIP7YPL211W RPL28P02406 149 aaKnown RBP2.18□□□□□ -2.06
NIP7YPL211W ATP5P09457 212 aa2.18□□□□□ -2.06
NIP7YPL211W AQY2P0CD90 149 aa2.18□□□□□ -2.06
NIP7YPL211W HAP3P13434 144 aa2.18□□□□□ -2.06
NIP7YPL211W SCM4P32564 187 aa2.18□□□□□ -2.06
NIP7YPL211W RPF1P38805 295 aaKnown RBP2.18□□□□□ -2.06
NIP7YPL211W MRPS12P53732 153 aa2.18□□□□□ -2.06
NIP7YPL211W YNR077CP53758 84 aa2.18□□□□□ -2.06
NIP7YPL211W IGO2Q9P305 131 aa2.18□□□□□ -2.06
NIP7YPL211W CWP2P43497 92 aa2.17□□□□□ -2.06
NIP7YPL211W YNL190WP53872 204 aa2.17□□□□□ -2.06
NIP7YPL211W SMD1Q02260 146 aaPredicted RBP2.17□□□□□ -2.06
NIP7YPL211W MBF1O14467 151 aaKnown RBP2.16□□□□□ -2.06
NIP7YPL211W UGX2P32772 223 aa2.16□□□□□ -2.06
NIP7YPL211W MVB12P42939 101 aa2.16□□□□□ -2.06
NIP7YPL211W ABF2Q02486 183 aa2.16□□□□□ -2.06
NIP7YPL211W YGL041C-BQ3E750 60 aa2.16□□□□□ -2.06
NIP7YPL211W YDL085C-AQ3E7B7 68 aaKnown RBP2.16□□□□□ -2.06
NIP7YPL211W YLL006W-AQ3E814 58 aa2.16□□□□□ -2.06
NIP7YPL211W ECM12O13529 151 aa2.15□□□□□ -2.07
NIP7YPL211W YBL039W-BP0C268 59 aa2.15□□□□□ -2.07
NIP7YPL211W YFL019CP43576 117 aa2.15□□□□□ -2.07
NIP7YPL211W SAE3P89114 91 aa2.15□□□□□ -2.07
NIP7YPL211W YML079WQ03629 201 aa2.15□□□□□ -2.07
NIP7YPL211W PAU23Q07987 124 aa2.15□□□□□ -2.07
NIP7YPL211W PAU17Q12370 124 aa2.15□□□□□ -2.07
NIP7YPL211W STF1P01098 86 aa2.14□□□□□ -2.07
NIP7YPL211W RPL29P05747 59 aaPredicted RBP2.14□□□□□ -2.07
NIP7YPL211W ELC1Q03071 99 aa2.14□□□□□ -2.07
NIP7YPL211W HPA2Q06592 156 aa2.14□□□□□ -2.07
NIP7YPL211W YLR307C-AQ3E825 87 aa2.14□□□□□ -2.07
NIP7YPL211W YAL067W-AQ8TGK6 75 aa2.14□□□□□ -2.07
NIP7YPL211W Q0032Q9ZZX7 96 aa2.14□□□□□ -2.07
NIP7YPL211W AIM19P40502 157 aa2.13□□□□□ -2.07
NIP7YPL211W YIA6P40556 373 aa2.13□□□□□ -2.07
NIP7YPL211W LCL1Q02786 101 aa2.13□□□□□ -2.07
NIP7YPL211W YLR363W-AQ3E747 85 aa2.13□□□□□ -2.07
NIP7YPL211W YOR020W-AQ3E824 90 aa2.13□□□□□ -2.07
NIP7YPL211W GLC8P41818 229 aa2.12□□□□□ -2.07
NIP7YPL211W RGM1Q00453 211 aa2.12□□□□□ -2.07
NIP7YPL211W UBC4P15731 148 aa2.11□□□□□ -2.07
NIP7YPL211W COX10P21592 462 aa2.11□□□□□ -2.07
NIP7YPL211W YHR130CP38834 111 aa2.11□□□□□ -2.07
NIP7YPL211W YER181CP40097 107 aa2.11□□□□□ -2.07
NIP7YPL211W KNH1P50112 268 aa2.11□□□□□ -2.07
NIP7YPL211W YGL193CP53097 103 aa2.11□□□□□ -2.07
NIP7YPL211W MMS2P53152 137 aa2.11□□□□□ -2.07
NIP7YPL211W CWC27Q02770 301 aa2.11□□□□□ -2.07
NIP7YPL211W YKL023C-AQ2V2P3 75 aa2.11□□□□□ -2.07
NIP7YPL211W PAI3P01094 68 aa2.1□□□□□ -2.07
NIP7YPL211W RPL26AP05743 127 aaKnown RBP2.1□□□□□ -2.07
NIP7YPL211W RPL26BP53221 127 aaKnown RBP2.1□□□□□ -2.07
NIP7YPL211W EOS1P53938 366 aa2.1□□□□□ -2.07
NIP7YPL211W ICY1Q04329 127 aa2.1□□□□□ -2.07
NIP7YPL211W IRC21Q04772 201 aa2.1□□□□□ -2.07
NIP7YPL211W YLR296WQ05898 108 aa2.1□□□□□ -2.07
NIP7YPL211W NHP2P32495 156 aaPredicted RBP2.09□□□□□ -2.07
NIP7YPL211W POP7P38291 140 aa2.09□□□□□ -2.07
NIP7YPL211W LSM6Q06406 86 aaKnown RBP2.09□□□□□ -2.07
NIP7YPL211W YER039C-AP0CD97 72 aa2.08□□□□□ -2.08
NIP7YPL211W YPL257WQ08974 193 aa2.08□□□□□ -2.08
NIP7YPL211W YIL102C-AQ2V2P5 75 aa2.08□□□□□ -2.08
NIP7YPL211W YOR034C-AQ3E735 80 aa2.08□□□□□ -2.08
NIP7YPL211W YBR230W-AQ3E762 66 aa2.08□□□□□ -2.08
NIP7YPL211W LSO2Q3E772 92 aaKnown RBP2.08□□□□□ -2.08
NIP7YPL211W YBL112CQ3E7Y4 105 aa2.08□□□□□ -2.08
NIP7YPL211W YNL042W-BQ3E7Z2 85 aa2.08□□□□□ -2.08
NIP7YPL211W YJL127C-BQ3E828 52 aa2.08□□□□□ -2.08
NIP7YPL211W DDR48P18899 430 aaKnown RBP2.07□□□□□ -2.08
NIP7YPL211W FYV5P25585 152 aa2.07□□□□□ -2.08
NIP7YPL211W MRPL24P36525 258 aaPredicted RBP2.07□□□□□ -2.08
NIP7YPL211W HUR1P45820 110 aa2.07□□□□□ -2.08
NIP7YPL211W YLR236CA0A023PZG4 107 aa2.06□□□□□ -2.08
NIP7YPL211W YLR156WP0CE96 114 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms