RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W BET5Q03630 159 aa4.6□□□□□ -1.67
CTF19YPL018W PBA1Q05778 276 aa4.6□□□□□ -1.67
CTF19YPL018W YBL112CQ3E7Y4 105 aa4.6□□□□□ -1.67
CTF19YPL018W YPR010C-AA5Z2X5 72 aa4.59□□□□□ -1.67
CTF19YPL018W RPL33AP05744 107 aaKnown RBP4.59□□□□□ -1.67
CTF19YPL018W ATP15P21306 62 aa4.59□□□□□ -1.67
CTF19YPL018W SCM4P32564 187 aa4.59□□□□□ -1.67
CTF19YPL018W RPL33BP41056 107 aaKnown RBP4.59□□□□□ -1.67
CTF19YPL018W YGL034CP53186 121 aa4.59□□□□□ -1.67
CTF19YPL018W RTC6O14464 93 aa4.58□□□□□ -1.68
CTF19YPL018W ADH1P00330 348 aaKnown RBP4.58□□□□□ -1.68
CTF19YPL018W ANB1P19211 157 aa4.58□□□□□ -1.68
CTF19YPL018W YCR007CP25354 239 aa4.58□□□□□ -1.68
CTF19YPL018W MSL1P40567 111 aaPredicted RBP4.58□□□□□ -1.68
CTF19YPL018W SFT1P43682 97 aa4.58□□□□□ -1.68
CTF19YPL018W YLR412C-AQ3E742 68 aa4.58□□□□□ -1.68
CTF19YPL018W KTI11Q3E840 82 aa4.58□□□□□ -1.68
CTF19YPL018W SEC11P15367 167 aa4.57□□□□□ -1.68
CTF19YPL018W PEX17P40155 199 aa4.57□□□□□ -1.68
CTF19YPL018W SBH1P52870 82 aa4.57□□□□□ -1.68
CTF19YPL018W YPL261CQ08976 102 aa4.57□□□□□ -1.68
CTF19YPL018W TSC3Q3E790 80 aa4.57□□□□□ -1.68
CTF19YPL018W YLL066W-BQ8TGJ7 56 aa4.57□□□□□ -1.68
CTF19YPL018W MRPL44P19956 98 aa4.56□□□□□ -1.68
CTF19YPL018W NAT5Q08689 176 aa4.56□□□□□ -1.68
CTF19YPL018W HYP2P23301 157 aaKnown RBP4.55□□□□□ -1.68
CTF19YPL018W YAR029WP39549 74 aa4.55□□□□□ -1.68
CTF19YPL018W DFM1Q12743 341 aaKnown RBP4.55□□□□□ -1.68
CTF19YPL018W RRT15Q3E811 62 aa4.55□□□□□ -1.68
CTF19YPL018W ENV10Q99382 181 aa4.55□□□□□ -1.68
CTF19YPL018W YPL229WQ99395 206 aa4.55□□□□□ -1.68
CTF19YPL018W MBF1O14467 151 aaKnown RBP4.54□□□□□ -1.68
CTF19YPL018W ARO2P28777 376 aaKnown RBP4.54□□□□□ -1.68
CTF19YPL018W YMR295CQ03559 197 aa4.54□□□□□ -1.68
CTF19YPL018W YDL157CQ12082 118 aa4.54□□□□□ -1.68
CTF19YPL018W YKL044WP36092 106 aa4.53□□□□□ -1.68
CTF19YPL018W YBR219CP38317 127 aa4.53□□□□□ -1.68
CTF19YPL018W SHU1P38751 150 aa4.53□□□□□ -1.68
CTF19YPL018W YHR130CP38834 111 aa4.53□□□□□ -1.68
CTF19YPL018W YDR115WQ04598 105 aa4.53□□□□□ -1.68
CTF19YPL018W YPR195CQ06594 109 aa4.53□□□□□ -1.68
CTF19YPL018W YAR023CD6VPM8 179 aa4.52□□□□□ -1.69
CTF19YPL018W ATP5P09457 212 aa4.52□□□□□ -1.69
CTF19YPL018W YLR194CQ05777 254 aa4.52□□□□□ -1.69
CTF19YPL018W YDL022C-AP0C5L6 82 aa4.51□□□□□ -1.69
CTF19YPL018W YAL064WP39711 94 aa4.51□□□□□ -1.69
CTF19YPL018W RPC10P40422 70 aa4.51□□□□□ -1.69
CTF19YPL018W ISD11Q6Q560 94 aa4.51□□□□□ -1.69
CTF19YPL018W YMR175W-AQ3E766 64 aa4.5□□□□□ -1.69
CTF19YPL018W YBL081WP38180 368 aaKnown RBP4.49□□□□□ -1.69
CTF19YPL018W PPT2Q12036 173 aa4.49□□□□□ -1.69
CTF19YPL018W COX14P39103 70 aa4.48□□□□□ -1.69
CTF19YPL018W YER181CP40097 107 aa4.48□□□□□ -1.69
CTF19YPL018W QCR8P08525 94 aa4.47□□□□□ -1.69
CTF19YPL018W CDC43P18898 376 aa4.47□□□□□ -1.69
CTF19YPL018W YEL067CP39978 195 aa4.47□□□□□ -1.69
CTF19YPL018W YAL065CO13511 128 aa4.46□□□□□ -1.7
CTF19YPL018W RAD6P06104 172 aa4.46□□□□□ -1.7
CTF19YPL018W COX10P21592 462 aa4.46□□□□□ -1.7
CTF19YPL018W VTC1P40046 129 aaRIP-Chip data4.46□□□□□ -1.7not detected
CTF19YPL018W MRPS12P53732 153 aa4.46□□□□□ -1.7
CTF19YPL018W SNA2P56508 79 aa4.46□□□□□ -1.7
CTF19YPL018W YHR139C-AO13536 103 aa4.45□□□□□ -1.7
CTF19YPL018W HAP3P13434 144 aa4.45□□□□□ -1.7
CTF19YPL018W YNR077CP53758 84 aa4.45□□□□□ -1.7
CTF19YPL018W SMD1Q02260 146 aaPredicted RBP4.45□□□□□ -1.7
CTF19YPL018W PAU23Q07987 124 aa4.45□□□□□ -1.7
CTF19YPL018W PAU17Q12370 124 aa4.45□□□□□ -1.7
CTF19YPL018W YDR034C-AP0C289 58 aa4.44□□□□□ -1.7
CTF19YPL018W YGL193CP53097 103 aa4.44□□□□□ -1.7
CTF19YPL018W YGR164WP53291 111 aa4.44□□□□□ -1.7
CTF19YPL018W YNL190WP53872 204 aa4.44□□□□□ -1.7
CTF19YPL018W YDL241WQ07738 123 aa4.44□□□□□ -1.7
CTF19YPL018W GAT4P40569 121 aa4.43□□□□□ -1.7
CTF19YPL018W YDR029WQ12111 104 aa4.43□□□□□ -1.7
CTF19YPL018W AQY2P0CD90 149 aa4.42□□□□□ -1.7
CTF19YPL018W MID2P36027 376 aa4.42□□□□□ -1.7
CTF19YPL018W EDC2P40023 145 aaPredicted RBP4.42□□□□□ -1.7
CTF19YPL018W CWP2P43497 92 aa4.42□□□□□ -1.7
CTF19YPL018W SKI6P46948 246 aaPredicted RBP4.42□□□□□ -1.7
CTF19YPL018W YML079WQ03629 201 aa4.42□□□□□ -1.7
CTF19YPL018W YLR363W-AQ3E747 85 aa4.42□□□□□ -1.7
CTF19YPL018W SMP1P38128 452 aa4.41□□□□□ -1.7
CTF19YPL018W LCL2Q08045 131 aa4.41□□□□□ -1.7
CTF19YPL018W YBL008W-AQ3E821 79 aa4.41□□□□□ -1.7
CTF19YPL018W TDA8Q6B2U8 126 aa4.41□□□□□ -1.7
CTF19YPL018W YLL006W-AQ3E814 58 aa4.4□□□□□ -1.71
CTF19YPL018W MVB12P42939 101 aa4.39□□□□□ -1.71
CTF19YPL018W YFR032C-BQ8TGU2 87 aa4.39□□□□□ -1.71
CTF19YPL018W YGL041C-BQ3E750 60 aa4.38□□□□□ -1.71
CTF19YPL018W YBL039W-BP0C268 59 aa4.37□□□□□ -1.71
CTF19YPL018W YFL019CP43576 117 aa4.37□□□□□ -1.71
CTF19YPL018W HPA2Q06592 156 aa4.37□□□□□ -1.71
CTF19YPL018W Q0032Q9ZZX7 96 aa4.37□□□□□ -1.71
CTF19YPL018W PAI3P01094 68 aa4.36□□□□□ -1.71
CTF19YPL018W MDN1Q12019 4910 aaKnown RBP4.35□□□□□ -1.71
CTF19YPL018W ECM12O13529 151 aa4.35□□□□□ -1.71
CTF19YPL018W AIM19P40502 157 aa4.34□□□□□ -1.71
CTF19YPL018W YOL014WQ08110 124 aa4.34□□□□□ -1.71
CTF19YPL018W YOR020W-AQ3E824 90 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms