RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W YAR023CD6VPM8 179 aa5.94□□□□□ -1.46
AMF1YOR378W OXA1P39952 402 aa5.94□□□□□ -1.46
AMF1YOR378W ELC1Q03071 99 aa5.94□□□□□ -1.46
AMF1YOR378W YDL241WQ07738 123 aa5.94□□□□□ -1.46
AMF1YOR378W YBL081WP38180 368 aaKnown RBP5.93□□□□□ -1.46
AMF1YOR378W YFR057WP43625 151 aa5.93□□□□□ -1.46
AMF1YOR378W YPR170W-BP0C5R9 85 aa5.92□□□□□ -1.46
AMF1YOR378W UGX2P32772 223 aa5.92□□□□□ -1.46
AMF1YOR378W YPR195CQ06594 109 aa5.91□□□□□ -1.46
AMF1YOR378W CWP2P43497 92 aa5.9□□□□□ -1.46
AMF1YOR378W YNL190WP53872 204 aa5.9□□□□□ -1.46
AMF1YOR378W CDC43P18898 376 aa5.89□□□□□ -1.47
AMF1YOR378W RUB1Q03919 77 aa5.89□□□□□ -1.47
AMF1YOR378W ANB1P19211 157 aa5.89□□□□□ -1.47
AMF1YOR378W SOH1P38633 127 aa5.89□□□□□ -1.47
AMF1YOR378W MBF1O14467 151 aaKnown RBP5.88□□□□□ -1.47
AMF1YOR378W ABF2Q02486 183 aa5.87□□□□□ -1.47
AMF1YOR378W AQY2P0CD90 149 aa5.86□□□□□ -1.47
AMF1YOR378W YER181CP40097 107 aa5.86□□□□□ -1.47
AMF1YOR378W SNA2P56508 79 aa5.86□□□□□ -1.47
AMF1YOR378W SMD1Q02260 146 aaPredicted RBP5.86□□□□□ -1.47
AMF1YOR378W YLL006W-AQ3E814 58 aa5.86□□□□□ -1.47
AMF1YOR378W MID2P36027 376 aa5.85□□□□□ -1.47
AMF1YOR378W UBC11P52492 156 aa5.85□□□□□ -1.47
AMF1YOR378W PAI3P01094 68 aa5.84□□□□□ -1.48
AMF1YOR378W MVB12P42939 101 aa5.84□□□□□ -1.48
AMF1YOR378W YLR296WQ05898 108 aa5.84□□□□□ -1.48
AMF1YOR378W YDR029WQ12111 104 aa5.84□□□□□ -1.48
AMF1YOR378W YKL023C-AQ2V2P3 75 aa5.84□□□□□ -1.48
AMF1YOR378W MRP10O75012 95 aa5.83□□□□□ -1.48
AMF1YOR378W YIA6P40556 373 aa5.83□□□□□ -1.48
AMF1YOR378W YPL229WQ99395 206 aa5.83□□□□□ -1.48
AMF1YOR378W YDR034C-AP0C289 58 aa5.82□□□□□ -1.48
AMF1YOR378W CPR1P14832 162 aaKnown RBP5.82□□□□□ -1.48
AMF1YOR378W YFL019CP43576 117 aa5.82□□□□□ -1.48
AMF1YOR378W YOR020W-AQ3E824 90 aa5.82□□□□□ -1.48
AMF1YOR378W YBL039W-BP0C268 59 aa5.81□□□□□ -1.48
AMF1YOR378W HPA2Q06592 156 aa5.81□□□□□ -1.48
AMF1YOR378W POP7P38291 140 aa5.8□□□□□ -1.48
AMF1YOR378W YHR130CP38834 111 aa5.8□□□□□ -1.48
AMF1YOR378W RGM1Q00453 211 aa5.8□□□□□ -1.48
AMF1YOR378W STF1P01098 86 aa5.79□□□□□ -1.48
AMF1YOR378W RPL29P05747 59 aaPredicted RBP5.79□□□□□ -1.48
AMF1YOR378W YIL102C-AQ2V2P5 75 aa5.79□□□□□ -1.48
AMF1YOR378W YGL041C-BQ3E750 60 aa5.79□□□□□ -1.48
AMF1YOR378W NHP2P32495 156 aaPredicted RBP5.78□□□□□ -1.48
AMF1YOR378W GAT4P40569 121 aa5.78□□□□□ -1.48
AMF1YOR378W LSM6Q06406 86 aaKnown RBP5.78□□□□□ -1.48
AMF1YOR378W COX10P21592 462 aa5.77□□□□□ -1.49
AMF1YOR378W SMP1P38128 452 aa5.77□□□□□ -1.49
AMF1YOR378W YNL198CP40166 100 aa5.77□□□□□ -1.49
AMF1YOR378W AIM19P40502 157 aa5.77□□□□□ -1.49
AMF1YOR378W ECM12O13529 151 aa5.76□□□□□ -1.49
AMF1YOR378W KNH1P50112 268 aa5.76□□□□□ -1.49
AMF1YOR378W LCL2Q08045 131 aa5.76□□□□□ -1.49
AMF1YOR378W Q0032Q9ZZX7 96 aa5.76□□□□□ -1.49
AMF1YOR378W ARO2P28777 376 aaKnown RBP5.75□□□□□ -1.49
AMF1YOR378W PEX22P39718 180 aa5.75□□□□□ -1.49
AMF1YOR378W EOS1P53938 366 aa5.75□□□□□ -1.49
AMF1YOR378W YPL257WQ08974 193 aa5.75□□□□□ -1.49
AMF1YOR378W MET32Q12041 191 aa5.75□□□□□ -1.49
AMF1YOR378W ISU2Q12056 156 aa5.74□□□□□ -1.49
AMF1YOR378W IGD1P43598 195 aa5.74□□□□□ -1.49
AMF1YOR378W IRC21Q04772 201 aa5.74□□□□□ -1.49
AMF1YOR378W UBC4P15731 148 aa5.73□□□□□ -1.49
AMF1YOR378W ICY1Q04329 127 aa5.72□□□□□ -1.49
AMF1YOR378W MDN1Q12019 4910 aaKnown RBP5.72□□□□□ -1.49
AMF1YOR378W RPL26AP05743 127 aaKnown RBP5.71□□□□□ -1.5
AMF1YOR378W RPL26BP53221 127 aaKnown RBP5.71□□□□□ -1.5
AMF1YOR378W SLO1Q3E784 85 aa5.71□□□□□ -1.5
AMF1YOR378W YNL162W-AQ3E7A8 72 aa5.71□□□□□ -1.5
AMF1YOR378W HYP2P23301 157 aaKnown RBP5.7□□□□□ -1.5
AMF1YOR378W MRPL24P36525 258 aaPredicted RBP5.7□□□□□ -1.5
AMF1YOR378W HUR1P45820 110 aa5.69□□□□□ -1.5
AMF1YOR378W YOR034C-AQ3E735 80 aa5.69□□□□□ -1.5
AMF1YOR378W YLR307C-AQ3E825 87 aa5.68□□□□□ -1.5
AMF1YOR378W YGL193CP53097 103 aa5.67□□□□□ -1.5
AMF1YOR378W LCL1Q02786 101 aa5.66□□□□□ -1.5
AMF1YOR378W YLR236CA0A023PZG4 107 aa5.65□□□□□ -1.5
AMF1YOR378W YBR230W-AQ3E762 66 aa5.64□□□□□ -1.51
AMF1YOR378W YNL042W-BQ3E7Z2 85 aa5.64□□□□□ -1.51
AMF1YOR378W YJL127C-BQ3E828 52 aa5.63□□□□□ -1.51
AMF1YOR378W YER039C-AP0CD97 72 aa5.62□□□□□ -1.51
AMF1YOR378W FYV5P25585 152 aa5.62□□□□□ -1.51
AMF1YOR378W DUT1P33317 147 aa5.62□□□□□ -1.51
AMF1YOR378W MSA2P36157 363 aa5.62□□□□□ -1.51
AMF1YOR378W GIS2P53849 153 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
AMF1YOR378W SPT4P32914 102 aaPredicted RBP5.59□□□□□ -1.51
AMF1YOR378W MPC3P53311 146 aa5.59□□□□□ -1.51
AMF1YOR378W MMS2P53152 137 aa5.58□□□□□ -1.52
AMF1YOR378W DDR2P89113 61 aa5.58□□□□□ -1.52
AMF1YOR378W RPP2AP05319 106 aaKnown RBP5.56□□□□□ -1.52
AMF1YOR378W YLR156WP0CE96 114 aa5.56□□□□□ -1.52
AMF1YOR378W YLR159WP0CE97 114 aa5.56□□□□□ -1.52
AMF1YOR378W YLR161WP0CE98 114 aa5.56□□□□□ -1.52
AMF1YOR378W DSE2P38844 325 aa5.56□□□□□ -1.52
AMF1YOR378W SFT1P43682 97 aa5.56□□□□□ -1.52
AMF1YOR378W YNL184CP53876 108 aa5.55□□□□□ -1.52
AMF1YOR378W YJR107C-AP0CT86 78 aa5.54□□□□□ -1.52
AMF1YOR378W OST2P46964 130 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms