RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W PAU23Q07987 124 aa2.63□□□□□ -1.99
ROD1YOR018W PAU17Q12370 124 aa2.63□□□□□ -1.99
ROD1YOR018W COX14P39103 70 aa2.63□□□□□ -1.99
ROD1YOR018W YOR034C-AQ3E735 80 aa2.63□□□□□ -1.99
ROD1YOR018W UGX2P32772 223 aa2.62□□□□□ -1.99
ROD1YOR018W ARO2P28777 376 aaKnown RBP2.62□□□□□ -1.99
ROD1YOR018W GLC8P41818 229 aa2.62□□□□□ -1.99
ROD1YOR018W RTC6O14464 93 aa2.61□□□□□ -1.99
ROD1YOR018W SPC1P46965 94 aa2.61□□□□□ -1.99
ROD1YOR018W ERI1P62651 68 aaKnown RBP2.61□□□□□ -1.99
ROD1YOR018W CWC27Q02770 301 aa2.61□□□□□ -1.99
ROD1YOR018W YAR023CD6VPM8 179 aa2.61□□□□□ -1.99
ROD1YOR018W ELC1Q03071 99 aa2.61□□□□□ -1.99
ROD1YOR018W LSO2Q3E772 92 aaKnown RBP2.61□□□□□ -1.99
ROD1YOR018W IGO2Q9P305 131 aa2.61□□□□□ -1.99
ROD1YOR018W RPC10P40422 70 aa2.6□□□□□ -1.99
ROD1YOR018W YLR363W-AQ3E747 85 aa2.6□□□□□ -1.99
ROD1YOR018W ENV10Q99382 181 aa2.6□□□□□ -1.99
ROD1YOR018W MBF1O14467 151 aaKnown RBP2.6□□□□□ -1.99
ROD1YOR018W HAP3P13434 144 aa2.6□□□□□ -1.99
ROD1YOR018W YNL198CP40166 100 aa2.6□□□□□ -1.99
ROD1YOR018W ADH1P00330 348 aaKnown RBP2.59□□□□□ -1.99
ROD1YOR018W ERG28P40030 148 aa2.59□□□□□ -1.99
ROD1YOR018W PEX17P40155 199 aa2.59□□□□□ -1.99
ROD1YOR018W CWP2P43497 92 aa2.59□□□□□ -1.99
ROD1YOR018W YPR170W-BP0C5R9 85 aa2.59□□□□□ -2
ROD1YOR018W TOA2P32774 122 aa2.59□□□□□ -2
ROD1YOR018W SNA2P56508 79 aa2.59□□□□□ -2
ROD1YOR018W SMD1Q02260 146 aaPredicted RBP2.59□□□□□ -2
ROD1YOR018W YLL006W-AQ3E814 58 aa2.59□□□□□ -2
ROD1YOR018W YCR043CP25361 127 aa2.58□□□□□ -2
ROD1YOR018W IGD1P43598 195 aa2.58□□□□□ -2
ROD1YOR018W LCL2Q08045 131 aa2.58□□□□□ -2
ROD1YOR018W ANB1P19211 157 aa2.58□□□□□ -2
ROD1YOR018W HPA2Q06592 156 aa2.58□□□□□ -2
ROD1YOR018W YMR175W-AQ3E766 64 aa2.57□□□□□ -2
ROD1YOR018W QCR8P08525 94 aa2.57□□□□□ -2
ROD1YOR018W YPL229WQ99395 206 aa2.57□□□□□ -2
ROD1YOR018W YDR034C-AP0C289 58 aa2.56□□□□□ -2
ROD1YOR018W AQY2P0CD90 149 aa2.56□□□□□ -2
ROD1YOR018W YAR029WP39549 74 aa2.56□□□□□ -2
ROD1YOR018W YER181CP40097 107 aa2.56□□□□□ -2
ROD1YOR018W GAT4P40569 121 aa2.56□□□□□ -2
ROD1YOR018W MVB12P42939 101 aa2.56□□□□□ -2
ROD1YOR018W PAI3P01094 68 aa2.55□□□□□ -2
ROD1YOR018W PEX22P39718 180 aa2.55□□□□□ -2
ROD1YOR018W RGM1Q00453 211 aa2.55□□□□□ -2
ROD1YOR018W YML079WQ03629 201 aa2.55□□□□□ -2
ROD1YOR018W PPT2Q12036 173 aa2.55□□□□□ -2
ROD1YOR018W YIA6P40556 373 aa2.54□□□□□ -2
ROD1YOR018W YPR010C-AA5Z2X5 72 aa2.54□□□□□ -2
ROD1YOR018W YLR296WQ05898 108 aa2.54□□□□□ -2
ROD1YOR018W YDR029WQ12111 104 aa2.54□□□□□ -2
ROD1YOR018W YIL102C-AQ2V2P5 75 aa2.54□□□□□ -2
ROD1YOR018W AIM19P40502 157 aa2.53□□□□□ -2
ROD1YOR018W KNH1P50112 268 aa2.53□□□□□ -2
ROD1YOR018W ABF2Q02486 183 aa2.53□□□□□ -2
ROD1YOR018W IRC21Q04772 201 aa2.53□□□□□ -2
ROD1YOR018W LSM6Q06406 86 aaKnown RBP2.53□□□□□ -2
ROD1YOR018W DSE2P38844 325 aa2.52□□□□□ -2.01
ROD1YOR018W HYP2P23301 157 aaKnown RBP2.51□□□□□ -2.01
ROD1YOR018W YFL019CP43576 117 aa2.51□□□□□ -2.01
ROD1YOR018W YDL241WQ07738 123 aa2.51□□□□□ -2.01
ROD1YOR018W YKL023C-AQ2V2P3 75 aa2.51□□□□□ -2.01
ROD1YOR018W Q0032Q9ZZX7 96 aa2.51□□□□□ -2.01
ROD1YOR018W NHP2P32495 156 aaPredicted RBP2.51□□□□□ -2.01
ROD1YOR018W MPC3P53311 146 aa2.51□□□□□ -2.01
ROD1YOR018W STF1P01098 86 aa2.5□□□□□ -2.01
ROD1YOR018W YBL039W-BP0C268 59 aa2.5□□□□□ -2.01
ROD1YOR018W YLR156WP0CE96 114 aa2.49□□□□□ -2.01
ROD1YOR018W YLR159WP0CE97 114 aa2.49□□□□□ -2.01
ROD1YOR018W YLR161WP0CE98 114 aa2.49□□□□□ -2.01
ROD1YOR018W UBC4P15731 148 aa2.49□□□□□ -2.01
ROD1YOR018W MRPL24P36525 258 aaPredicted RBP2.49□□□□□ -2.01
ROD1YOR018W YHR130CP38834 111 aa2.49□□□□□ -2.01
ROD1YOR018W HUR1P45820 110 aa2.49□□□□□ -2.01
ROD1YOR018W GIS2P53849 153 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
ROD1YOR018W YMR230W-AQ3E7B5 62 aa2.49□□□□□ -2.01
ROD1YOR018W YLR307C-AQ3E825 87 aa2.49□□□□□ -2.01
ROD1YOR018W RPL29P05747 59 aaPredicted RBP2.48□□□□□ -2.01
ROD1YOR018W YOR020W-AQ3E824 90 aa2.48□□□□□ -2.01
ROD1YOR018W ECM12O13529 151 aa2.48□□□□□ -2.01
ROD1YOR018W ICY1Q04329 127 aa2.48□□□□□ -2.01
ROD1YOR018W YLR236CA0A023PZG4 107 aa2.47□□□□□ -2.01
ROD1YOR018W DDR48P18899 430 aaKnown RBP2.47□□□□□ -2.01
ROD1YOR018W COX10P21592 462 aa2.47□□□□□ -2.01
ROD1YOR018W MSA2P36157 363 aa2.47□□□□□ -2.01
ROD1YOR018W POP7P38291 140 aa2.47□□□□□ -2.01
ROD1YOR018W YGL193CP53097 103 aa2.47□□□□□ -2.01
ROD1YOR018W YPL257WQ08974 193 aa2.47□□□□□ -2.01
ROD1YOR018W YBR230W-AQ3E762 66 aa2.47□□□□□ -2.01
ROD1YOR018W YJL127C-BQ3E828 52 aa2.47□□□□□ -2.01
ROD1YOR018W YER078W-AQ3E7A2 54 aa2.46□□□□□ -2.01
ROD1YOR018W EDC1P53080 175 aaPredicted RBP2.46□□□□□ -2.02
ROD1YOR018W RPA12P32529 125 aaKnown RBP2.45□□□□□ -2.02
ROD1YOR018W MMS2P53152 137 aa2.45□□□□□ -2.02
ROD1YOR018W BSC4P53841 131 aa2.45□□□□□ -2.02
ROD1YOR018W YHR007C-AQ07074 71 aa2.45□□□□□ -2.02
ROD1YOR018W YGL041C-BQ3E750 60 aa2.45□□□□□ -2.02
ROD1YOR018W FYV5P25585 152 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms