RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	RPL28	P02406	149 aa	Known RBP	2.75	□□□□□ -1.97
SEC2	YNL272C	YDR034C-A	P0C289	58 aa		2.75	□□□□□ -1.97
SEC2	YNL272C	SCM4	P32564	187 aa		2.75	□□□□□ -1.97
SEC2	YNL272C	RPF1	P38805	295 aa	Known RBP	2.75	□□□□□ -1.97
SEC2	YNL272C	COX14	P39103	70 aa		2.75	□□□□□ -1.97
SEC2	YNL272C	PEX17	P40155	199 aa		2.75	□□□□□ -1.97
SEC2	YNL272C	SNA2	P56508	79 aa		2.75	□□□□□ -1.97
SEC2	YNL272C	LSO2	Q3E772	92 aa	Known RBP	2.75	□□□□□ -1.97
SEC2	YNL272C	VTC1	P40046	129 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
SEC2	YNL272C	MRPS12	P53732	153 aa		2.74	□□□□□ -1.97
SEC2	YNL272C	LCL2	Q08045	131 aa		2.74	□□□□□ -1.97
SEC2	YNL272C	ADH1	P00330	348 aa	Known RBP	2.73	□□□□□ -1.97
SEC2	YNL272C	ATP5	P09457	212 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	YFR057W	P43625	151 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	YNR077C	P53758	84 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	YNL190W	P53872	204 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	SMD1	Q02260	146 aa	Predicted RBP	2.73	□□□□□ -1.97
SEC2	YNL272C	TOA2	P32774	122 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
SEC2	YNL272C	YIL002W-A	Q3E7Z5	69 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	IGO2	Q9P305	131 aa		2.73	□□□□□ -1.97
SEC2	YNL272C	QCR8	P08525	94 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	MID2	P36027	376 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	YDR029W	Q12111	104 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	UGX2	P32772	223 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	OXA1	P39952	402 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	SAE3	P89114	91 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	YDL241W	Q07738	123 aa		2.72	□□□□□ -1.97
SEC2	YNL272C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.72	□□□□□ -1.97
SEC2	YNL272C	AQY2	P0CD90	149 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	YFL067W	P43537	175 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	YPL229W	Q99395	206 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	SMP1	P38128	452 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	CWP2	P43497	92 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	ABF2	Q02486	183 aa		2.71	□□□□□ -1.98
SEC2	YNL272C	HAP3	P13434	144 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	PAU23	Q07987	124 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	PAU17	Q12370	124 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	PEX22	P39718	180 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	MVB12	P42939	101 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	YML079W	Q03629	201 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	YLL006W-A	Q3E814	58 aa		2.7	□□□□□ -1.98
SEC2	YNL272C	ELC1	Q03071	99 aa		2.69	□□□□□ -1.98
SEC2	YNL272C	MBF1	O14467	151 aa	Known RBP	2.68	□□□□□ -1.98
SEC2	YNL272C	HPA2	Q06592	156 aa		2.68	□□□□□ -1.98
SEC2	YNL272C	YLR363W-A	Q3E747	85 aa		2.68	□□□□□ -1.98
SEC2	YNL272C	GLC8	P41818	229 aa		2.68	□□□□□ -1.98
SEC2	YNL272C	Q0032	Q9ZZX7	96 aa		2.68	□□□□□ -1.98
SEC2	YNL272C	ECM12	O13529	151 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	YBL039W-B	P0C268	59 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	YFL019C	P43576	117 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	EOS1	P53938	366 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	YGL041C-B	Q3E750	60 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	YIA6	P40556	373 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	IGD1	P43598	195 aa		2.67	□□□□□ -1.98
SEC2	YNL272C	STF1	P01098	86 aa		2.66	□□□□□ -1.98
SEC2	YNL272C	AIM19	P40502	157 aa		2.66	□□□□□ -1.98
SEC2	YNL272C	YLR307C-A	Q3E825	87 aa		2.66	□□□□□ -1.98
SEC2	YNL272C	ARO2	P28777	376 aa	Known RBP	2.66	□□□□□ -1.98
SEC2	YNL272C	CWC27	Q02770	301 aa		2.66	□□□□□ -1.98
SEC2	YNL272C	HHF1	P02309	103 aa	Known RBP	2.65	□□□□□ -1.99
SEC2	YNL272C	YER181C	P40097	107 aa		2.65	□□□□□ -1.99
SEC2	YNL272C	RGM1	Q00453	211 aa		2.65	□□□□□ -1.99
SEC2	YNL272C	RPL29	P05747	59 aa	Predicted RBP	2.65	□□□□□ -1.99
SEC2	YNL272C	KNH1	P50112	268 aa		2.65	□□□□□ -1.99
SEC2	YNL272C	LCL1	Q02786	101 aa		2.65	□□□□□ -1.99
SEC2	YNL272C	PAI3	P01094	68 aa		2.64	□□□□□ -1.99
SEC2	YNL272C	YOR034C-A	Q3E735	80 aa		2.64	□□□□□ -1.99
SEC2	YNL272C	YOR020W-A	Q3E824	90 aa		2.64	□□□□□ -1.99
SEC2	YNL272C	UBC4	P15731	148 aa		2.63	□□□□□ -1.99
SEC2	YNL272C	COX10	P21592	462 aa		2.63	□□□□□ -1.99
SEC2	YNL272C	YHR130C	P38834	111 aa		2.63	□□□□□ -1.99
SEC2	YNL272C	IRC21	Q04772	201 aa		2.63	□□□□□ -1.99
SEC2	YNL272C	NHP2	P32495	156 aa	Predicted RBP	2.63	□□□□□ -1.99
SEC2	YNL272C	MMS2	P53152	137 aa		2.63	□□□□□ -1.99
SEC2	YNL272C	YGL193C	P53097	103 aa		2.62	□□□□□ -1.99
SEC2	YNL272C	MHR1	Q06630	226 aa		2.62	□□□□□ -1.99
SEC2	YNL272C	YKL023C-A	Q2V2P3	75 aa		2.62	□□□□□ -1.99
SEC2	YNL272C	ICY1	Q04329	127 aa		2.62	□□□□□ -1.99
SEC2	YNL272C	YLR296W	Q05898	108 aa		2.62	□□□□□ -1.99
SEC2	YNL272C	LSM6	Q06406	86 aa	Known RBP	2.62	□□□□□ -1.99
SEC2	YNL272C	RPL26A	P05743	127 aa	Known RBP	2.61	□□□□□ -1.99
SEC2	YNL272C	POP7	P38291	140 aa		2.61	□□□□□ -1.99
SEC2	YNL272C	YJR085C	P47131	105 aa	Known RBP	2.61	□□□□□ -1.99
SEC2	YNL272C	RPL26B	P53221	127 aa	Known RBP	2.61	□□□□□ -1.99
SEC2	YNL272C	DDR48	P18899	430 aa	Known RBP	2.6	□□□□□ -1.99
SEC2	YNL272C	YEL045C	P32616	141 aa		2.6	□□□□□ -1.99
SEC2	YNL272C	MRPL24	P36525	258 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC2	YNL272C	HUR1	P45820	110 aa		2.6	□□□□□ -1.99
SEC2	YNL272C	YPL257W	Q08974	193 aa		2.6	□□□□□ -1.99
SEC2	YNL272C	YIL102C-A	Q2V2P5	75 aa		2.6	□□□□□ -1.99
SEC2	YNL272C	YJL127C-B	Q3E828	52 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	YPR170W-B	P0C5R9	85 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	YNL198C	P40166	100 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	DDR2	P89113	61 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	YBR230W-A	Q3E762	66 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	YNL042W-B	Q3E7Z2	85 aa		2.59	□□□□□ -1.99
SEC2	YNL272C	RUB1	Q03919	77 aa		2.58	□□□□□ -2
SEC2	YNL272C	YLR156W	P0CE96	114 aa		2.58	□□□□□ -2
SEC2	YNL272C	YLR159W	P0CE97	114 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms