RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A ABF2Q02486 183 aa8.77□□□□□ -1.01
LSM3YLR438C-A YDR034C-AP0C289 58 aa8.76□□□□□ -1.01
LSM3YLR438C-A OXA1P39952 402 aa8.76□□□□□ -1.01
LSM3YLR438C-A GLC8P41818 229 aa8.76□□□□□ -1.01
LSM3YLR438C-A YFR057WP43625 151 aa8.76□□□□□ -1.01
LSM3YLR438C-A UGX2P32772 223 aa8.75□□□□□ -1.01
LSM3YLR438C-A ELC1Q03071 99 aa8.75□□□□□ -1.01
LSM3YLR438C-A YML079WQ03629 201 aa8.75□□□□□ -1.01
LSM3YLR438C-A YDR029WQ12111 104 aa8.75□□□□□ -1.01
LSM3YLR438C-A GAT4P40569 121 aa8.74□□□□□ -1.01
LSM3YLR438C-A MDN1Q12019 4910 aaKnown RBP8.73□□□□□ -1.01
LSM3YLR438C-A AQY2P0CD90 149 aa8.73□□□□□ -1.01
LSM3YLR438C-A CWP2P43497 92 aa8.73□□□□□ -1.01
LSM3YLR438C-A YNL190WP53872 204 aa8.73□□□□□ -1.01
LSM3YLR438C-A YLR363W-AQ3E747 85 aa8.73□□□□□ -1.01
LSM3YLR438C-A YPL229WQ99395 206 aa8.71□□□□□ -1.02
LSM3YLR438C-A MBF1O14467 151 aaKnown RBP8.7□□□□□ -1.02
LSM3YLR438C-A LSO2Q3E772 92 aaKnown RBP8.7□□□□□ -1.02
LSM3YLR438C-A YLL006W-AQ3E814 58 aa8.69□□□□□ -1.02
LSM3YLR438C-A MID2P36027 376 aa8.68□□□□□ -1.02
LSM3YLR438C-A MVB12P42939 101 aa8.68□□□□□ -1.02
LSM3YLR438C-A CWC27Q02770 301 aa8.68□□□□□ -1.02
LSM3YLR438C-A LCL2Q08045 131 aa8.67□□□□□ -1.02
LSM3YLR438C-A YGL041C-BQ3E750 60 aa8.67□□□□□ -1.02
LSM3YLR438C-A YBL039W-BP0C268 59 aa8.65□□□□□ -1.02
LSM3YLR438C-A UBC11P52492 156 aa8.65□□□□□ -1.02
LSM3YLR438C-A YFL019CP43576 117 aa8.64□□□□□ -1.03
LSM3YLR438C-A YIA6P40556 373 aa8.63□□□□□ -1.03
LSM3YLR438C-A Q0032Q9ZZX7 96 aa8.63□□□□□ -1.03
LSM3YLR438C-A YER181CP40097 107 aa8.62□□□□□ -1.03
LSM3YLR438C-A HPA2Q06592 156 aa8.62□□□□□ -1.03
LSM3YLR438C-A ECM12O13529 151 aa8.6□□□□□ -1.03
LSM3YLR438C-A PAI3P01094 68 aa8.6□□□□□ -1.03
LSM3YLR438C-A PEX22P39718 180 aa8.6□□□□□ -1.03
LSM3YLR438C-A YOR020W-AQ3E824 90 aa8.6□□□□□ -1.03
LSM3YLR438C-A STF1P01098 86 aa8.59□□□□□ -1.03
LSM3YLR438C-A SMP1P38128 452 aa8.59□□□□□ -1.03
LSM3YLR438C-A YHR130CP38834 111 aa8.58□□□□□ -1.04
LSM3YLR438C-A RPL29P05747 59 aaPredicted RBP8.57□□□□□ -1.04
LSM3YLR438C-A RGM1Q00453 211 aa8.57□□□□□ -1.04
LSM3YLR438C-A COX10P21592 462 aa8.56□□□□□ -1.04
LSM3YLR438C-A NHP2P32495 156 aaPredicted RBP8.56□□□□□ -1.04
LSM3YLR438C-A AIM19P40502 157 aa8.56□□□□□ -1.04
LSM3YLR438C-A EOS1P53938 366 aa8.55□□□□□ -1.04
LSM3YLR438C-A POP7P38291 140 aa8.54□□□□□ -1.04
LSM3YLR438C-A KNH1P50112 268 aa8.53□□□□□ -1.04
LSM3YLR438C-A YKL023C-AQ2V2P3 75 aa8.53□□□□□ -1.04
LSM3YLR438C-A ARO2P28777 376 aaKnown RBP8.52□□□□□ -1.05
LSM3YLR438C-A IGD1P43598 195 aa8.52□□□□□ -1.05
LSM3YLR438C-A LCL1Q02786 101 aa8.52□□□□□ -1.05
LSM3YLR438C-A YLR296WQ05898 108 aa8.52□□□□□ -1.05
LSM3YLR438C-A GIS2P53849 153 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05 RIP-Chip
LSM3YLR438C-A MET32Q12041 191 aa8.51□□□□□ -1.05
LSM3YLR438C-A RPL26AP05743 127 aaKnown RBP8.5□□□□□ -1.05
LSM3YLR438C-A RPL26BP53221 127 aaKnown RBP8.5□□□□□ -1.05
LSM3YLR438C-A LSM6Q06406 86 aaKnown RBP8.5□□□□□ -1.05
LSM3YLR438C-A YLR307C-AQ3E825 87 aa8.5□□□□□ -1.05
LSM3YLR438C-A UBC4P15731 148 aa8.49□□□□□ -1.05
LSM3YLR438C-A IRC21Q04772 201 aa8.49□□□□□ -1.05
LSM3YLR438C-A CPR1P14832 162 aaKnown RBP8.47□□□□□ -1.05
LSM3YLR438C-A ICY1Q04329 127 aa8.47□□□□□ -1.05
LSM3YLR438C-A UIP3P39547 235 aa8.46□□□□□ -1.06
LSM3YLR438C-A YIL102C-AQ2V2P5 75 aa8.46□□□□□ -1.06
LSM3YLR438C-A YNL162W-AQ3E7A8 72 aa8.45□□□□□ -1.06
LSM3YLR438C-A MHR1Q06630 226 aa8.43□□□□□ -1.06
LSM3YLR438C-A MRPL24P36525 258 aaPredicted RBP8.42□□□□□ -1.06
LSM3YLR438C-A HUR1P45820 110 aa8.42□□□□□ -1.06
LSM3YLR438C-A YGL193CP53097 103 aa8.42□□□□□ -1.06
LSM3YLR438C-A YPR170W-BP0C5R9 85 aa8.41□□□□□ -1.06
LSM3YLR438C-A MMS2P53152 137 aa8.41□□□□□ -1.06
LSM3YLR438C-A YOR034C-AQ3E735 80 aa8.41□□□□□ -1.06
LSM3YLR438C-A YER039C-AP0CD97 72 aa8.38□□□□□ -1.07
LSM3YLR438C-A YNL042W-BQ3E7Z2 85 aa8.37□□□□□ -1.07
LSM3YLR438C-A YNL198CP40166 100 aa8.36□□□□□ -1.07
LSM3YLR438C-A YPL257WQ08974 193 aa8.36□□□□□ -1.07
LSM3YLR438C-A YJL127C-BQ3E828 52 aa8.36□□□□□ -1.07
LSM3YLR438C-A HYP2P23301 157 aaKnown RBP8.35□□□□□ -1.07
LSM3YLR438C-A YBR230W-AQ3E762 66 aa8.35□□□□□ -1.07
LSM3YLR438C-A FYV5P25585 152 aa8.34□□□□□ -1.07
LSM3YLR438C-A DDR2P89113 61 aa8.34□□□□□ -1.07
LSM3YLR438C-A ISU2Q12056 156 aa8.32□□□□□ -1.08
LSM3YLR438C-A YLR236CA0A023PZG4 107 aa8.31□□□□□ -1.08
LSM3YLR438C-A SPT4P32914 102 aaPredicted RBP8.3□□□□□ -1.08
LSM3YLR438C-A YBL112CQ3E7Y4 105 aa8.3□□□□□ -1.08
LSM3YLR438C-A MSA2P36157 363 aa8.28□□□□□ -1.08
LSM3YLR438C-A MPC3P53311 146 aa8.28□□□□□ -1.08
LSM3YLR438C-A TMA7Q3E764 64 aaKnown RBP8.28□□□□□ -1.08
LSM3YLR438C-A SAP30P38429 201 aa8.27□□□□□ -1.09
LSM3YLR438C-A YLR415CO13578 112 aa8.26□□□□□ -1.09
LSM3YLR438C-A YLR156WP0CE96 114 aa8.26□□□□□ -1.09
LSM3YLR438C-A YLR159WP0CE97 114 aa8.26□□□□□ -1.09
LSM3YLR438C-A YLR161WP0CE98 114 aa8.26□□□□□ -1.09
LSM3YLR438C-A BET1P22804 142 aa8.24□□□□□ -1.09
LSM3YLR438C-A SFT1P43682 97 aa8.24□□□□□ -1.09
LSM3YLR438C-A DDR48P18899 430 aaKnown RBP8.23□□□□□ -1.09
LSM3YLR438C-A DUT1P33317 147 aa8.22□□□□□ -1.09
LSM3YLR438C-A DSE2P38844 325 aa8.22□□□□□ -1.09
LSM3YLR438C-A YFL067WP43537 175 aa8.22□□□□□ -1.09
LSM3YLR438C-A BSC4P53841 131 aa8.22□□□□□ -1.09
LSM3YLR438C-A EDC2P40023 145 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 98.3 ms