RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	YMR295C	Q03559	197 aa		4.71	□□□□□ -1.65
MSC3	YLR219W	YLR194C	Q05777	254 aa		4.71	□□□□□ -1.65
MSC3	YLR219W	YPR010C-A	A5Z2X5	72 aa		4.7	□□□□□ -1.66
MSC3	YLR219W	SVP26	P38869	228 aa		4.7	□□□□□ -1.66
MSC3	YLR219W	CPR1	P14832	162 aa	Known RBP	4.7	□□□□□ -1.66
MSC3	YLR219W	YPR195C	Q06594	109 aa		4.7	□□□□□ -1.66
MSC3	YLR219W	RPL28	P02406	149 aa	Known RBP	4.69	□□□□□ -1.66
MSC3	YLR219W	YKL044W	P36092	106 aa		4.69	□□□□□ -1.66
MSC3	YLR219W	YEL067C	P39978	195 aa		4.69	□□□□□ -1.66
MSC3	YLR219W	RPL32	P38061	130 aa	Known RBP	4.68	□□□□□ -1.66
MSC3	YLR219W	ENV10	Q99382	181 aa		4.68	□□□□□ -1.66
MSC3	YLR219W	YBL081W	P38180	368 aa	Known RBP	4.68	□□□□□ -1.66
MSC3	YLR219W	SHU1	P38751	150 aa		4.68	□□□□□ -1.66
MSC3	YLR219W	YAR029W	P39549	74 aa		4.68	□□□□□ -1.66
MSC3	YLR219W	YCR007C	P25354	239 aa		4.67	□□□□□ -1.66
MSC3	YLR219W	RPC10	P40422	70 aa		4.67	□□□□□ -1.66
MSC3	YLR219W	MDN1	Q12019	4910 aa	Known RBP	4.67	□□□□□ -1.66
MSC3	YLR219W	ATP5	P09457	212 aa		4.67	□□□□□ -1.66
MSC3	YLR219W	YPL073C	P40323	161 aa		4.67	□□□□□ -1.66
MSC3	YLR219W	YER039C-A	P0CD97	72 aa		4.66	□□□□□ -1.66
MSC3	YLR219W	YAL064W	P39711	94 aa		4.66	□□□□□ -1.66
MSC3	YLR219W	VTC1	P40046	129 aa	RIP-Chip data	4.66	□□□□□ -1.66	not detected
MSC3	YLR219W	MRPS12	P53732	153 aa		4.66	□□□□□ -1.66
MSC3	YLR219W	YNR077C	P53758	84 aa		4.66	□□□□□ -1.66
MSC3	YLR219W	YAL065C	O13511	128 aa		4.65	□□□□□ -1.67
MSC3	YLR219W	PEX17	P40155	199 aa		4.65	□□□□□ -1.67
MSC3	YLR219W	ELC1	Q03071	99 aa		4.65	□□□□□ -1.67
MSC3	YLR219W	COX14	P39103	70 aa		4.64	□□□□□ -1.67
MSC3	YLR219W	YMR175W-A	Q3E766	64 aa		4.64	□□□□□ -1.67
MSC3	YLR219W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.64	□□□□□ -1.67
MSC3	YLR219W	ARO2	P28777	376 aa	Known RBP	4.64	□□□□□ -1.67
MSC3	YLR219W	YAR023C	D6VPM8	179 aa		4.63	□□□□□ -1.67
MSC3	YLR219W	PAU23	Q07987	124 aa		4.63	□□□□□ -1.67
MSC3	YLR219W	PAU17	Q12370	124 aa		4.63	□□□□□ -1.67
MSC3	YLR219W	IGO2	Q9P305	131 aa		4.63	□□□□□ -1.67
MSC3	YLR219W	TOA2	P32774	122 aa		4.62	□□□□□ -1.67
MSC3	YLR219W	YNL190W	P53872	204 aa		4.62	□□□□□ -1.67
MSC3	YLR219W	QCR8	P08525	94 aa		4.61	□□□□□ -1.67
MSC3	YLR219W	ANB1	P19211	157 aa		4.61	□□□□□ -1.67
MSC3	YLR219W	ADH1	P00330	348 aa	Known RBP	4.6	□□□□□ -1.67
MSC3	YLR219W	YHR130C	P38834	111 aa		4.6	□□□□□ -1.67
MSC3	YLR219W	COF1	Q03048	143 aa	Known RBP	4.6	□□□□□ -1.67
MSC3	YLR219W	PPT2	Q12036	173 aa		4.6	□□□□□ -1.67
MSC3	YLR219W	PEX22	P39718	180 aa		4.6	□□□□□ -1.67
MSC3	YLR219W	YDL241W	Q07738	123 aa		4.6	□□□□□ -1.67
MSC3	YLR219W	MID2	P36027	376 aa		4.58	□□□□□ -1.68
MSC3	YLR219W	ISD11	Q6Q560	94 aa		4.58	□□□□□ -1.68
MSC3	YLR219W	PBI2	P0CT04	75 aa	Known RBP	4.57	□□□□□ -1.68
MSC3	YLR219W	CDC43	P18898	376 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	CWP2	P43497	92 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	YDR034C-A	P0C289	58 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	GAT4	P40569	121 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	SNA2	P56508	79 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	YPL229W	Q99395	206 aa		4.57	□□□□□ -1.68
MSC3	YLR219W	HAP3	P13434	144 aa		4.56	□□□□□ -1.68
MSC3	YLR219W	SMP1	P38128	452 aa		4.56	□□□□□ -1.68
MSC3	YLR219W	LCL2	Q08045	131 aa		4.56	□□□□□ -1.68
MSC3	YLR219W	YLL006W-A	Q3E814	58 aa		4.56	□□□□□ -1.68
MSC3	YLR219W	OST2	P46964	130 aa		4.55	□□□□□ -1.68
MSC3	YLR219W	YLR363W-A	Q3E747	85 aa		4.55	□□□□□ -1.68
MSC3	YLR219W	AQY2	P0CD90	149 aa		4.55	□□□□□ -1.68
MSC3	YLR219W	HYP2	P23301	157 aa	Known RBP	4.55	□□□□□ -1.68
MSC3	YLR219W	YDR029W	Q12111	104 aa		4.55	□□□□□ -1.68
MSC3	YLR219W	MBF1	O14467	151 aa	Known RBP	4.54	□□□□□ -1.68
MSC3	YLR219W	SMD1	Q02260	146 aa	Predicted RBP	4.54	□□□□□ -1.68
MSC3	YLR219W	MVB12	P42939	101 aa		4.54	□□□□□ -1.68
MSC3	YLR219W	YBL112C	Q3E7Y4	105 aa		4.54	□□□□□ -1.68
MSC3	YLR219W	SFT1	P43682	97 aa		4.53	□□□□□ -1.68
MSC3	YLR219W	SBH1	P52870	82 aa		4.53	□□□□□ -1.68
MSC3	YLR219W	YGR039W	P53225	103 aa		4.52	□□□□□ -1.69
MSC3	YLR219W	YML079W	Q03629	201 aa		4.52	□□□□□ -1.69
MSC3	YLR219W	HPA2	Q06592	156 aa		4.51	□□□□□ -1.69
MSC3	YLR219W	YFL019C	P43576	117 aa		4.51	□□□□□ -1.69
MSC3	YLR219W	IGD1	P43598	195 aa		4.51	□□□□□ -1.69
MSC3	YLR219W	YNL277W-A	Q3E7Z0	62 aa		4.51	□□□□□ -1.69
MSC3	YLR219W	KTI11	Q3E840	82 aa		4.5	□□□□□ -1.69
MSC3	YLR219W	YBL039W-B	P0C268	59 aa		4.5	□□□□□ -1.69
MSC3	YLR219W	YIA6	P40556	373 aa		4.5	□□□□□ -1.69
MSC3	YLR219W	RGM1	Q00453	211 aa		4.5	□□□□□ -1.69
MSC3	YLR219W	RPL29	P05747	59 aa	Predicted RBP	4.49	□□□□□ -1.69
MSC3	YLR219W	COX10	P21592	462 aa		4.49	□□□□□ -1.69
MSC3	YLR219W	YER181C	P40097	107 aa		4.49	□□□□□ -1.69
MSC3	YLR219W	SHH4	Q06236	168 aa		4.49	□□□□□ -1.69
MSC3	YLR219W	AIM19	P40502	157 aa		4.48	□□□□□ -1.69
MSC3	YLR219W	YLR296W	Q05898	108 aa		4.48	□□□□□ -1.69
MSC3	YLR219W	PAI3	P01094	68 aa		4.48	□□□□□ -1.69
MSC3	YLR219W	YKL023C-A	Q2V2P3	75 aa		4.48	□□□□□ -1.69
MSC3	YLR219W	ECM12	O13529	151 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	YLR412C-A	Q3E742	68 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	YOR020W-A	Q3E824	90 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	YPR170W-B	P0C5R9	85 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	YGL041C-B	Q3E750	60 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	Q0032	Q9ZZX7	96 aa		4.47	□□□□□ -1.69
MSC3	YLR219W	KNH1	P50112	268 aa		4.46	□□□□□ -1.7
MSC3	YLR219W	YNL162W-A	Q3E7A8	72 aa		4.46	□□□□□ -1.7
MSC3	YLR219W	YLR307C-A	Q3E825	87 aa		4.46	□□□□□ -1.7
MSC3	YLR219W	INO4	P13902	151 aa		4.45	□□□□□ -1.7
MSC3	YLR219W	IRC21	Q04772	201 aa		4.45	□□□□□ -1.7
MSC3	YLR219W	UBC4	P15731	148 aa		4.44	□□□□□ -1.7
MSC3	YLR219W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms