RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YDL241WQ07738 123 aa3.18□□□□□ -1.9
CBF5YLR175W HAP3P13434 144 aa3.17□□□□□ -1.9
CBF5YLR175W TOA2P32774 122 aa3.17□□□□□ -1.9
CBF5YLR175W RPF1P38805 295 aaKnown RBP3.17□□□□□ -1.9
CBF5YLR175W CIN5P40917 295 aa3.17□□□□□ -1.9
CBF5YLR175W MRPS12P53732 153 aa3.17□□□□□ -1.9
CBF5YLR175W ADH1P00330 348 aaKnown RBP3.16□□□□□ -1.9
CBF5YLR175W SVP26P38869 228 aa3.16□□□□□ -1.9
CBF5YLR175W GLC8P41818 229 aa3.16□□□□□ -1.9
CBF5YLR175W YML079WQ03629 201 aa3.16□□□□□ -1.9
CBF5YLR175W VTC1P40046 129 aaRIP-Chip data3.16□□□□□ -1.9not detected
CBF5YLR175W CWC27Q02770 301 aa3.16□□□□□ -1.9
CBF5YLR175W YLR363W-AQ3E747 85 aa3.16□□□□□ -1.9
CBF5YLR175W MBF1O14467 151 aaKnown RBP3.15□□□□□ -1.91
CBF5YLR175W UGX2P32772 223 aa3.15□□□□□ -1.91
CBF5YLR175W YBL081WP38180 368 aaKnown RBP3.15□□□□□ -1.91
CBF5YLR175W OXA1P39952 402 aa3.15□□□□□ -1.91
CBF5YLR175W CWP2P43497 92 aa3.15□□□□□ -1.91
CBF5YLR175W ELC1Q03071 99 aa3.15□□□□□ -1.91
CBF5YLR175W RRT15Q3E811 62 aa3.15□□□□□ -1.91
CBF5YLR175W YAR023CD6VPM8 179 aa3.14□□□□□ -1.91
CBF5YLR175W RPL28P02406 149 aaKnown RBP3.14□□□□□ -1.91
CBF5YLR175W YAL064WP39711 94 aa3.14□□□□□ -1.91
CBF5YLR175W YKL023C-AQ2V2P3 75 aa3.14□□□□□ -1.91
CBF5YLR175W YIL002W-AQ3E7Z5 69 aa3.14□□□□□ -1.91
CBF5YLR175W YPL229WQ99395 206 aa3.14□□□□□ -1.91
CBF5YLR175W YFR057WP43625 151 aa3.13□□□□□ -1.91
CBF5YLR175W YNL190WP53872 204 aa3.12□□□□□ -1.91
CBF5YLR175W YLR296WQ05898 108 aa3.12□□□□□ -1.91
CBF5YLR175W YPR195CQ06594 109 aa3.12□□□□□ -1.91
CBF5YLR175W RPL29P05747 59 aaPredicted RBP3.1□□□□□ -1.91
CBF5YLR175W AQY2P0CD90 149 aa3.1□□□□□ -1.91
CBF5YLR175W ANB1P19211 157 aa3.1□□□□□ -1.91
CBF5YLR175W YER181CP40097 107 aa3.1□□□□□ -1.91
CBF5YLR175W MVB12P42939 101 aa3.1□□□□□ -1.91
CBF5YLR175W RGM1Q00453 211 aa3.1□□□□□ -1.91
CBF5YLR175W ABF2Q02486 183 aa3.1□□□□□ -1.91
CBF5YLR175W MHR1Q06630 226 aa3.1□□□□□ -1.91
CBF5YLR175W YLL006W-AQ3E814 58 aa3.1□□□□□ -1.91
CBF5YLR175W YOR020W-AQ3E824 90 aa3.1□□□□□ -1.91
CBF5YLR175W PAI3P01094 68 aa3.09□□□□□ -1.91
CBF5YLR175W YPR170W-BP0C5R9 85 aa3.09□□□□□ -1.91
CBF5YLR175W POP7P38291 140 aa3.09□□□□□ -1.91
CBF5YLR175W YIA6P40556 373 aa3.09□□□□□ -1.91
CBF5YLR175W SNA2P56508 79 aa3.09□□□□□ -1.91
CBF5YLR175W YDR029WQ12111 104 aa3.09□□□□□ -1.91
CBF5YLR175W YBL039W-BP0C268 59 aa3.09□□□□□ -1.92
CBF5YLR175W YDR034C-AP0C289 58 aa3.09□□□□□ -1.92
CBF5YLR175W YFL019CP43576 117 aa3.09□□□□□ -1.92
CBF5YLR175W SMD1Q02260 146 aaPredicted RBP3.09□□□□□ -1.92
CBF5YLR175W HPA2Q06592 156 aa3.09□□□□□ -1.92
CBF5YLR175W YIL102C-AQ2V2P5 75 aa3.09□□□□□ -1.92
CBF5YLR175W YGL041C-BQ3E750 60 aa3.09□□□□□ -1.92
CBF5YLR175W COX10P21592 462 aa3.08□□□□□ -1.92
CBF5YLR175W MID2P36027 376 aa3.08□□□□□ -1.92
CBF5YLR175W YHR130CP38834 111 aa3.08□□□□□ -1.92
CBF5YLR175W LSM6Q06406 86 aaKnown RBP3.08□□□□□ -1.92
CBF5YLR175W YCR043CP25361 127 aa3.07□□□□□ -1.92
CBF5YLR175W SMP1P38128 452 aa3.07□□□□□ -1.92
CBF5YLR175W AIM19P40502 157 aa3.07□□□□□ -1.92
CBF5YLR175W ECM12O13529 151 aa3.06□□□□□ -1.92
CBF5YLR175W CPR1P14832 162 aaKnown RBP3.06□□□□□ -1.92
CBF5YLR175W UBC4P15731 148 aa3.06□□□□□ -1.92
CBF5YLR175W NHP2P32495 156 aaPredicted RBP3.06□□□□□ -1.92
CBF5YLR175W GAT4P40569 121 aa3.06□□□□□ -1.92
CBF5YLR175W KNH1P50112 268 aa3.06□□□□□ -1.92
CBF5YLR175W PEX22P39718 180 aa3.05□□□□□ -1.92
CBF5YLR175W IGD1P43598 195 aa3.05□□□□□ -1.92
CBF5YLR175W ICY1Q04329 127 aa3.05□□□□□ -1.92
CBF5YLR175W IRC21Q04772 201 aa3.05□□□□□ -1.92
CBF5YLR175W MDN1Q12019 4910 aaKnown RBP3.05□□□□□ -1.92
CBF5YLR175W YNL198CP40166 100 aa3.04□□□□□ -1.92
CBF5YLR175W LCL2Q08045 131 aa3.04□□□□□ -1.92
CBF5YLR175W YLR307C-AQ3E825 87 aa3.04□□□□□ -1.92
CBF5YLR175W Q0032Q9ZZX7 96 aa3.04□□□□□ -1.92
CBF5YLR175W ARO2P28777 376 aaKnown RBP3.03□□□□□ -1.92
CBF5YLR175W MRPL24P36525 258 aaPredicted RBP3.03□□□□□ -1.92
CBF5YLR175W YLR236CA0A023PZG4 107 aa3.03□□□□□ -1.93
CBF5YLR175W RPL26AP05743 127 aaKnown RBP3.03□□□□□ -1.93
CBF5YLR175W HYP2P23301 157 aaKnown RBP3.03□□□□□ -1.93
CBF5YLR175W YGL193CP53097 103 aa3.03□□□□□ -1.93
CBF5YLR175W RPL26BP53221 127 aaKnown RBP3.03□□□□□ -1.93
CBF5YLR175W HUR1P45820 110 aa3.02□□□□□ -1.93
CBF5YLR175W LCL1Q02786 101 aa3.01□□□□□ -1.93
CBF5YLR175W MSA2P36157 363 aa3□□□□□ -1.93
CBF5YLR175W YNL042W-BQ3E7Z2 85 aa3□□□□□ -1.93
CBF5YLR175W YER039C-AP0CD97 72 aa2.99□□□□□ -1.93
CBF5YLR175W FYV5P25585 152 aa2.99□□□□□ -1.93
CBF5YLR175W YOR034C-AQ3E735 80 aa2.99□□□□□ -1.93
CBF5YLR175W YBR230W-AQ3E762 66 aa2.99□□□□□ -1.93
CBF5YLR175W YJL127C-BQ3E828 52 aa2.99□□□□□ -1.93
CBF5YLR175W SPT4P32914 102 aaPredicted RBP2.98□□□□□ -1.93
CBF5YLR175W GIS2P53849 153 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93 RIP-Chip
CBF5YLR175W YPL257WQ08974 193 aa2.98□□□□□ -1.93
CBF5YLR175W SFT1P43682 97 aa2.97□□□□□ -1.93
CBF5YLR175W MPC3P53311 146 aa2.96□□□□□ -1.94
CBF5YLR175W DDR2P89113 61 aa2.96□□□□□ -1.94
CBF5YLR175W YJR107C-AP0CT86 78 aa2.95□□□□□ -1.94
CBF5YLR175W MMS2P53152 137 aa2.95□□□□□ -1.94
CBF5YLR175W YGR121W-AQ3E816 71 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms