RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	YPL073C	P40323	161 aa		3.17	□□□□□ -1.9
APS1	YLR170C	MSL1	P40567	111 aa	Predicted RBP	3.17	□□□□□ -1.9
APS1	YLR170C	CIN5	P40917	295 aa		3.17	□□□□□ -1.9
APS1	YLR170C	YNR077C	P53758	84 aa		3.17	□□□□□ -1.9
APS1	YLR170C	YPL261C	Q08976	102 aa		3.17	□□□□□ -1.9
APS1	YLR170C	PPT2	Q12036	173 aa		3.17	□□□□□ -1.9
APS1	YLR170C	SCS22	Q6Q595	175 aa		3.17	□□□□□ -1.9
APS1	YLR170C	YDR034C-A	P0C289	58 aa		3.16	□□□□□ -1.9
APS1	YLR170C	SCM4	P32564	187 aa		3.16	□□□□□ -1.9
APS1	YLR170C	LCL2	Q08045	131 aa		3.16	□□□□□ -1.9
APS1	YLR170C	NAT5	Q08689	176 aa		3.16	□□□□□ -1.9
APS1	YLR170C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.16	□□□□□ -1.9
APS1	YLR170C	ADH1	P00330	348 aa	Known RBP	3.15	□□□□□ -1.91
APS1	YLR170C	RPL29	P05747	59 aa	Predicted RBP	3.15	□□□□□ -1.91
APS1	YLR170C	ATP5	P09457	212 aa		3.15	□□□□□ -1.91
APS1	YLR170C	SMP1	P38128	452 aa		3.15	□□□□□ -1.91
APS1	YLR170C	CWP2	P43497	92 aa		3.15	□□□□□ -1.91
APS1	YLR170C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	RIP-Chip
APS1	YLR170C	YDR029W	Q12111	104 aa		3.15	□□□□□ -1.91
APS1	YLR170C	IGO2	Q9P305	131 aa		3.15	□□□□□ -1.91
APS1	YLR170C	HAP3	P13434	144 aa		3.14	□□□□□ -1.91
APS1	YLR170C	PAU23	Q07987	124 aa		3.14	□□□□□ -1.91
APS1	YLR170C	PAU17	Q12370	124 aa		3.14	□□□□□ -1.91
APS1	YLR170C	AQY2	P0CD90	149 aa		3.13	□□□□□ -1.91
APS1	YLR170C	UGX2	P32772	223 aa		3.12	□□□□□ -1.91
APS1	YLR170C	OXA1	P39952	402 aa		3.12	□□□□□ -1.91
APS1	YLR170C	MVB12	P42939	101 aa		3.12	□□□□□ -1.91
APS1	YLR170C	SNA2	P56508	79 aa		3.12	□□□□□ -1.91
APS1	YLR170C	RPL28	P02406	149 aa	Known RBP	3.11	□□□□□ -1.91
APS1	YLR170C	YFL019C	P43576	117 aa		3.11	□□□□□ -1.91
APS1	YLR170C	YKL023C-A	Q2V2P3	75 aa		3.11	□□□□□ -1.91
APS1	YLR170C	YGL041C-B	Q3E750	60 aa		3.11	□□□□□ -1.91
APS1	YLR170C	YLL006W-A	Q3E814	58 aa		3.11	□□□□□ -1.91
APS1	YLR170C	ECM12	O13529	151 aa		3.1	□□□□□ -1.91
APS1	YLR170C	YBL039W-B	P0C268	59 aa		3.1	□□□□□ -1.91
APS1	YLR170C	RPF1	P38805	295 aa	Known RBP	3.1	□□□□□ -1.91
APS1	YLR170C	PEX22	P39718	180 aa		3.1	□□□□□ -1.91
APS1	YLR170C	IGD1	P43598	195 aa		3.1	□□□□□ -1.91
APS1	YLR170C	YNL190W	P53872	204 aa		3.1	□□□□□ -1.91
APS1	YLR170C	RGM1	Q00453	211 aa		3.1	□□□□□ -1.91
APS1	YLR170C	YLR307C-A	Q3E825	87 aa		3.1	□□□□□ -1.91
APS1	YLR170C	UBC4	P15731	148 aa		3.09	□□□□□ -1.91
APS1	YLR170C	AIM19	P40502	157 aa		3.09	□□□□□ -1.91
APS1	YLR170C	YOR020W-A	Q3E824	90 aa		3.09	□□□□□ -1.91
APS1	YLR170C	CPR1	P14832	162 aa	Known RBP	3.08	□□□□□ -1.92
APS1	YLR170C	YFR057W	P43625	151 aa		3.08	□□□□□ -1.92
APS1	YLR170C	YGL193C	P53097	103 aa		3.08	□□□□□ -1.92
APS1	YLR170C	SAE3	P89114	91 aa		3.08	□□□□□ -1.92
APS1	YLR170C	ABF2	Q02486	183 aa		3.08	□□□□□ -1.92
APS1	YLR170C	LCL1	Q02786	101 aa		3.08	□□□□□ -1.92
APS1	YLR170C	HPA2	Q06592	156 aa		3.08	□□□□□ -1.92
APS1	YLR170C	SMD1	Q02260	146 aa	Predicted RBP	3.07	□□□□□ -1.92
APS1	YLR170C	YML079W	Q03629	201 aa		3.07	□□□□□ -1.92
APS1	YLR170C	YLR296W	Q05898	108 aa		3.07	□□□□□ -1.92
APS1	YLR170C	YLR363W-A	Q3E747	85 aa		3.07	□□□□□ -1.92
APS1	YLR170C	YAR1	P46683	200 aa		3.06	□□□□□ -1.92
APS1	YLR170C	ELC1	Q03071	99 aa		3.06	□□□□□ -1.92
APS1	YLR170C	COX10	P21592	462 aa		3.05	□□□□□ -1.92
APS1	YLR170C	HOT13	P36078	116 aa		3.05	□□□□□ -1.92
APS1	YLR170C	YIA6	P40556	373 aa		3.05	□□□□□ -1.92
APS1	YLR170C	ICY1	Q04329	127 aa		3.05	□□□□□ -1.92
APS1	YLR170C	Q0032	Q9ZZX7	96 aa		3.05	□□□□□ -1.92
APS1	YLR170C	POP7	P38291	140 aa		3.04	□□□□□ -1.92
APS1	YLR170C	KNH1	P50112	268 aa		3.04	□□□□□ -1.92
APS1	YLR170C	IRC21	Q04772	201 aa		3.04	□□□□□ -1.92
APS1	YLR170C	YLR236C	A0A023PZG4	107 aa		3.03	□□□□□ -1.92
APS1	YLR170C	MID2	P36027	376 aa		3.03	□□□□□ -1.92
APS1	YLR170C	YHR130C	P38834	111 aa		3.03	□□□□□ -1.92
APS1	YLR170C	YER181C	P40097	107 aa		3.03	□□□□□ -1.92
APS1	YLR170C	YNL042W-B	Q3E7Z2	85 aa		3.03	□□□□□ -1.92
APS1	YLR170C	YPL080C	Q02826	108 aa		3.02	□□□□□ -1.93
APS1	YLR170C	PAI3	P01094	68 aa		3.01	□□□□□ -1.93
APS1	YLR170C	YPR170W-B	P0C5R9	85 aa		3.01	□□□□□ -1.93
APS1	YLR170C	YER039C-A	P0CD97	72 aa		3.01	□□□□□ -1.93
APS1	YLR170C	MSA2	P36157	363 aa		3.01	□□□□□ -1.93
APS1	YLR170C	GLC8	P41818	229 aa		3.01	□□□□□ -1.93
APS1	YLR170C	CWC27	Q02770	301 aa		3.01	□□□□□ -1.93
APS1	YLR170C	LSM6	Q06406	86 aa	Known RBP	3.01	□□□□□ -1.93
APS1	YLR170C	YBR230W-A	Q3E762	66 aa		3.01	□□□□□ -1.93
APS1	YLR170C	YBL112C	Q3E7Y4	105 aa		3.01	□□□□□ -1.93
APS1	YLR170C	RPL26A	P05743	127 aa	Known RBP	3	□□□□□ -1.93
APS1	YLR170C	ARO2	P28777	376 aa	Known RBP	3	□□□□□ -1.93
APS1	YLR170C	SPT4	P32914	102 aa	Predicted RBP	3	□□□□□ -1.93
APS1	YLR170C	MMS2	P53152	137 aa		3	□□□□□ -1.93
APS1	YLR170C	RPL26B	P53221	127 aa	Known RBP	3	□□□□□ -1.93
APS1	YLR170C	YIL102C-A	Q2V2P5	75 aa		3	□□□□□ -1.93
APS1	YLR170C	LSO2	Q3E772	92 aa	Known RBP	3	□□□□□ -1.93
APS1	YLR170C	FYV5	P25585	152 aa		2.99	□□□□□ -1.93
APS1	YLR170C	MRPL24	P36525	258 aa	Predicted RBP	2.99	□□□□□ -1.93
APS1	YLR170C	YPL257W	Q08974	193 aa		2.99	□□□□□ -1.93
APS1	YLR170C	YGR121W-A	Q3E816	71 aa		2.99	□□□□□ -1.93
APS1	YLR170C	NHP2	P32495	156 aa	Predicted RBP	2.98	□□□□□ -1.93
APS1	YLR170C	EDC2	P40023	145 aa	Predicted RBP	2.98	□□□□□ -1.93
APS1	YLR170C	YJL127C-B	Q3E828	52 aa		2.98	□□□□□ -1.93
APS1	YLR170C	HUR1	P45820	110 aa		2.97	□□□□□ -1.93
APS1	YLR170C	YJR085C	P47131	105 aa	Known RBP	2.97	□□□□□ -1.93
APS1	YLR170C	SPG1	P50088	95 aa		2.97	□□□□□ -1.93
APS1	YLR170C	DDR2	P89113	61 aa		2.97	□□□□□ -1.93
APS1	YLR170C	YOR034C-A	Q3E735	80 aa		2.97	□□□□□ -1.93
APS1	YLR170C	YBR121C-A	P0C5L4	52 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms