RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YCH1P42937 148 aa8.24□□□□□ -1.09
SPT8YLR055C COX12Q01519 83 aa8.24□□□□□ -1.09
SPT8YLR055C YBL112CQ3E7Y4 105 aa8.24□□□□□ -1.09
SPT8YLR055C MRPL24P36525 258 aaPredicted RBP8.24□□□□□ -1.09
SPT8YLR055C YHR139C-AO13536 103 aa8.23□□□□□ -1.09
SPT8YLR055C YHR212W-AP0CX91 67 aa8.23□□□□□ -1.09
SPT8YLR055C PBA1Q05778 276 aa8.23□□□□□ -1.09
SPT8YLR055C YDR381C-AQ3E6R5 114 aa8.23□□□□□ -1.09
SPT8YLR055C YGR039WP53225 103 aa8.22□□□□□ -1.09
SPT8YLR055C PMP3P87284 55 aa8.22□□□□□ -1.09
SPT8YLR055C MSN1P22148 382 aa8.22□□□□□ -1.09
SPT8YLR055C RGM1Q00453 211 aa8.22□□□□□ -1.09
SPT8YLR055C TAR1Q8TGM6 124 aa8.22□□□□□ -1.09
SPT8YLR055C UBC5P15732 148 aa8.19□□□□□ -1.1
SPT8YLR055C SVP26P38869 228 aa8.19□□□□□ -1.1
SPT8YLR055C YMR295CQ03559 197 aa8.19□□□□□ -1.1
SPT8YLR055C PPT2Q12036 173 aa8.19□□□□□ -1.1
SPT8YLR055C YDR119W-AQ2V2P9 66 aa8.19□□□□□ -1.1
SPT8YLR055C ENV10Q99382 181 aa8.19□□□□□ -1.1
SPT8YLR055C YBR144CP34215 104 aa8.18□□□□□ -1.1
SPT8YLR055C CWP2P43497 92 aa8.18□□□□□ -1.1
SPT8YLR055C MSA2P36157 363 aa8.17□□□□□ -1.1
SPT8YLR055C KRE9P39005 276 aa8.17□□□□□ -1.1
SPT8YLR055C STF1P01098 86 aa8.17□□□□□ -1.1
SPT8YLR055C COF1Q03048 143 aaKnown RBP8.17□□□□□ -1.1
SPT8YLR055C COX14P39103 70 aa8.16□□□□□ -1.1
SPT8YLR055C YOR034C-AQ3E735 80 aa8.16□□□□□ -1.1
SPT8YLR055C RPL2AP0CX45 254 aaKnown RBP8.15□□□□□ -1.1
SPT8YLR055C RPL2BP0CX46 254 aaKnown RBP8.15□□□□□ -1.1
SPT8YLR055C RTG1P32607 177 aa8.15□□□□□ -1.1
SPT8YLR055C MPC2P38857 129 aa8.15□□□□□ -1.1
SPT8YLR055C ARC15P40518 154 aaRIP-Chip data8.15□□□□□ -1.1not detected
SPT8YLR055C RPS11AP0CX47 156 aaKnown RBP8.15□□□□□ -1.11
SPT8YLR055C RPS11BP0CX48 156 aaKnown RBP8.15□□□□□ -1.11
SPT8YLR055C SMP1P38128 452 aa8.15□□□□□ -1.11
SPT8YLR055C YBR219CP38317 127 aa8.15□□□□□ -1.11
SPT8YLR055C YAR029WP39549 74 aa8.15□□□□□ -1.11
SPT8YLR055C ALG13P53178 202 aa8.15□□□□□ -1.11
SPT8YLR055C RPR2P40571 144 aa8.14□□□□□ -1.11
SPT8YLR055C UBC11P52492 156 aa8.13□□□□□ -1.11
SPT8YLR055C YHL042WP38729 150 aa8.13□□□□□ -1.11
SPT8YLR055C YPS5P53057 165 aa8.13□□□□□ -1.11
SPT8YLR055C YOR020W-AQ3E824 90 aa8.13□□□□□ -1.11
SPT8YLR055C VAM10Q08474 114 aa8.12□□□□□ -1.11
SPT8YLR055C EMC6Q12431 108 aa8.1□□□□□ -1.11
SPT8YLR055C YLL006W-AQ3E814 58 aa8.1□□□□□ -1.11
SPT8YLR055C YLR236CA0A023PZG4 107 aa8.08□□□□□ -1.12
SPT8YLR055C KNH1P50112 268 aa8.08□□□□□ -1.12
SPT8YLR055C HAL1Q01766 294 aa8.08□□□□□ -1.12
SPT8YLR055C ECM12O13529 151 aa8.07□□□□□ -1.12
SPT8YLR055C YDR029WQ12111 104 aa8.07□□□□□ -1.12
SPT8YLR055C YLR415CO13578 112 aa8.06□□□□□ -1.12
SPT8YLR055C SHH4Q06236 168 aa8.06□□□□□ -1.12
SPT8YLR055C YPL038W-AQ3E7B4 63 aa8.06□□□□□ -1.12
SPT8YLR055C YDR274CP87283 123 aa8.05□□□□□ -1.12
SPT8YLR055C YLR122CQ12312 125 aa8.05□□□□□ -1.12
SPT8YLR055C YMR122W-AQ3E842 84 aa8.05□□□□□ -1.12
SPT8YLR055C YJR107C-AP0CT86 78 aa8.04□□□□□ -1.12
SPT8YLR055C IRC21Q04772 201 aa8.02□□□□□ -1.13
SPT8YLR055C YGL015CP33199 130 aa8.01□□□□□ -1.13
SPT8YLR055C YHL018WP38744 120 aaPredicted RBP8.01□□□□□ -1.13
SPT8YLR055C YBR126W-AQ8TGU7 68 aa8.01□□□□□ -1.13
SPT8YLR055C YSY6P38374 65 aa8□□□□□ -1.13
SPT8YLR055C YLR281CQ05863 155 aa8□□□□□ -1.13
SPT8YLR055C YAL065CO13511 128 aa7.99□□□□□ -1.13
SPT8YLR055C YER039C-AP0CD97 72 aa7.99□□□□□ -1.13
SPT8YLR055C TOM6P33448 61 aa7.99□□□□□ -1.13
SPT8YLR055C MPC3P53311 146 aa7.99□□□□□ -1.13
SPT8YLR055C YGR240C-AQ3E786 66 aa7.98□□□□□ -1.13
SPT8YLR055C ERI1P62651 68 aaKnown RBP7.96□□□□□ -1.13
SPT8YLR055C YLR285C-AQ3E771 56 aa7.96□□□□□ -1.13
SPT8YLR055C YCR001WP25347 104 aa7.96□□□□□ -1.14
SPT8YLR055C ICY1Q04329 127 aa7.96□□□□□ -1.14
SPT8YLR055C ATP18P81450 59 aa7.94□□□□□ -1.14
SPT8YLR055C YMR175W-AQ3E766 64 aa7.94□□□□□ -1.14
SPT8YLR055C EDC1P53080 175 aaPredicted RBP7.93□□□□□ -1.14
SPT8YLR055C YBR121C-AP0C5L4 52 aa7.92□□□□□ -1.14
SPT8YLR055C SBH1P52870 82 aa7.92□□□□□ -1.14
SPT8YLR055C RPL29P05747 59 aaPredicted RBP7.91□□□□□ -1.14
SPT8YLR055C MLF3P32047 452 aa7.91□□□□□ -1.14
SPT8YLR055C CRC1Q12289 327 aa7.91□□□□□ -1.14
SPT8YLR055C ERG28P40030 148 aa7.9□□□□□ -1.14
SPT8YLR055C GAT4P40569 121 aa7.9□□□□□ -1.14
SPT8YLR055C YDL241WQ07738 123 aa7.9□□□□□ -1.14
SPT8YLR055C YLR156WP0CE96 114 aa7.89□□□□□ -1.15
SPT8YLR055C YLR159WP0CE97 114 aa7.89□□□□□ -1.15
SPT8YLR055C YLR161WP0CE98 114 aa7.89□□□□□ -1.15
SPT8YLR055C SMD1Q02260 146 aaPredicted RBP7.89□□□□□ -1.15
SPT8YLR055C MVB12P42939 101 aa7.89□□□□□ -1.15
SPT8YLR055C RPS28BP0C0X0 67 aaKnown RBP7.87□□□□□ -1.15
SPT8YLR055C YFR009W-AP0C5M9 85 aa7.87□□□□□ -1.15
SPT8YLR055C YCR050CP25630 102 aa7.87□□□□□ -1.15
SPT8YLR055C AUA1P32450 94 aa7.87□□□□□ -1.15
SPT8YLR055C YRA2P36036 203 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
SPT8YLR055C RPS28AQ3E7X9 67 aaPredicted RBP7.87□□□□□ -1.15
SPT8YLR055C YER187WP40102 141 aa7.85□□□□□ -1.15
SPT8YLR055C RPC10P40422 70 aa7.85□□□□□ -1.15
SPT8YLR055C RPL38P49167 78 aaKnown RBP7.85□□□□□ -1.15
SPT8YLR055C RSM19P53733 91 aaPredicted RBP7.85□□□□□ -1.15
SPT8YLR055C RDS3Q06835 107 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms