RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W MRPS12P53732 153 aa2.65□□□□□ -1.99
CDC8YJR057W YLR296WQ05898 108 aa2.65□□□□□ -1.99
CDC8YJR057W RPL28P02406 149 aaKnown RBP2.64□□□□□ -1.99
CDC8YJR057W RPL18AP0CX49 186 aaKnown RBP2.64□□□□□ -1.99
CDC8YJR057W RPL18BP0CX50 186 aaKnown RBP2.64□□□□□ -1.99
CDC8YJR057W YER181CP40097 107 aa2.64□□□□□ -1.99
CDC8YJR057W YNL198CP40166 100 aa2.64□□□□□ -1.99
CDC8YJR057W RDS3Q06835 107 aaPredicted RBP2.64□□□□□ -1.99
CDC8YJR057W YIL102C-AQ2V2P5 75 aa2.64□□□□□ -1.99
CDC8YJR057W YMR122W-AQ3E842 84 aa2.64□□□□□ -1.99
CDC8YJR057W PAI3P01094 68 aa2.63□□□□□ -1.99
CDC8YJR057W UGX2P32772 223 aa2.63□□□□□ -1.99
CDC8YJR057W YBR219CP38317 127 aa2.63□□□□□ -1.99
CDC8YJR057W YNL190WP53872 204 aa2.63□□□□□ -1.99
CDC8YJR057W ERI1P62651 68 aaKnown RBP2.63□□□□□ -1.99
CDC8YJR057W YMR295CQ03559 197 aa2.63□□□□□ -1.99
CDC8YJR057W YKL023C-AQ2V2P3 75 aa2.63□□□□□ -1.99
CDC8YJR057W QCR8P08525 94 aa2.62□□□□□ -1.99
CDC8YJR057W YAR029WP39549 74 aa2.62□□□□□ -1.99
CDC8YJR057W ANB1P19211 157 aa2.61□□□□□ -1.99
CDC8YJR057W HYP2P23301 157 aaKnown RBP2.61□□□□□ -1.99
CDC8YJR057W AUA1P32450 94 aa2.61□□□□□ -1.99
CDC8YJR057W ERG28P40030 148 aa2.61□□□□□ -1.99
CDC8YJR057W ENV10Q99382 181 aa2.61□□□□□ -1.99
CDC8YJR057W RPL33AP05744 107 aaKnown RBP2.6□□□□□ -1.99
CDC8YJR057W NHP2P32495 156 aaPredicted RBP2.6□□□□□ -1.99
CDC8YJR057W TOA2P32774 122 aa2.6□□□□□ -1.99
CDC8YJR057W POP7P38291 140 aa2.6□□□□□ -1.99
CDC8YJR057W RPL33BP41056 107 aaKnown RBP2.6□□□□□ -1.99
CDC8YJR057W YMR320WQ04897 101 aa2.6□□□□□ -1.99
CDC8YJR057W LSM6Q06406 86 aaKnown RBP2.6□□□□□ -1.99
CDC8YJR057W YPR010C-AA5Z2X5 72 aa2.59□□□□□ -1.99
CDC8YJR057W YAL065CO13511 128 aa2.59□□□□□ -1.99
CDC8YJR057W CWP2P43497 92 aa2.59□□□□□ -1.99
CDC8YJR057W SPC1P46965 94 aa2.59□□□□□ -1.99
CDC8YJR057W DYN1P36022 4092 aa2.58□□□□□ -2
CDC8YJR057W YRA2P36036 203 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
CDC8YJR057W YHR130CP38834 111 aa2.58□□□□□ -2
CDC8YJR057W RPC10P40422 70 aa2.58□□□□□ -2
CDC8YJR057W YIA6P40556 373 aa2.58□□□□□ -2
CDC8YJR057W YMR175W-AQ3E766 64 aa2.58□□□□□ -2
CDC8YJR057W YLL066W-BQ8TGJ7 56 aa2.58□□□□□ -2
CDC8YJR057W YBL081WP38180 368 aaKnown RBP2.57□□□□□ -2
CDC8YJR057W SVP26P38869 228 aa2.57□□□□□ -2
CDC8YJR057W YAL064WP39711 94 aa2.57□□□□□ -2
CDC8YJR057W RGM1Q00453 211 aa2.57□□□□□ -2
CDC8YJR057W YDR115WQ04598 105 aa2.57□□□□□ -2
CDC8YJR057W YDL241WQ07738 123 aa2.57□□□□□ -2
CDC8YJR057W YLL006W-AQ3E814 58 aa2.57□□□□□ -2
CDC8YJR057W RTC6O14464 93 aa2.56□□□□□ -2
CDC8YJR057W IGD1P43598 195 aa2.56□□□□□ -2
CDC8YJR057W EOS1P53938 366 aa2.56□□□□□ -2
CDC8YJR057W SMD1Q02260 146 aaPredicted RBP2.56□□□□□ -2
CDC8YJR057W HPA2Q06592 156 aa2.56□□□□□ -2
CDC8YJR057W RRT15Q3E811 62 aa2.56□□□□□ -2
CDC8YJR057W YOR020W-AQ3E824 90 aa2.56□□□□□ -2
CDC8YJR057W ABF2Q02486 183 aa2.55□□□□□ -2
CDC8YJR057W COX10P21592 462 aa2.54□□□□□ -2
CDC8YJR057W MRPL24P36525 258 aaPredicted RBP2.54□□□□□ -2
CDC8YJR057W KNH1P50112 268 aa2.54□□□□□ -2
CDC8YJR057W YPL229WQ99395 206 aa2.54□□□□□ -2
CDC8YJR057W YAR023CD6VPM8 179 aa2.53□□□□□ -2
CDC8YJR057W RPL29P05747 59 aaPredicted RBP2.53□□□□□ -2
CDC8YJR057W AQY2P0CD90 149 aa2.53□□□□□ -2
CDC8YJR057W DSE2P38844 325 aa2.53□□□□□ -2
CDC8YJR057W MVB12P42939 101 aa2.53□□□□□ -2
CDC8YJR057W HUR1P45820 110 aa2.53□□□□□ -2
CDC8YJR057W IRC21Q04772 201 aa2.53□□□□□ -2
CDC8YJR057W YOR034C-AQ3E735 80 aa2.53□□□□□ -2
CDC8YJR057W STF1P01098 86 aa2.52□□□□□ -2.01
CDC8YJR057W RPA12P32529 125 aaKnown RBP2.52□□□□□ -2.01
CDC8YJR057W AIM19P40502 157 aa2.52□□□□□ -2.01
CDC8YJR057W YFL019CP43576 117 aa2.52□□□□□ -2.01
CDC8YJR057W OST2P46964 130 aa2.52□□□□□ -2.01
CDC8YJR057W ICY1Q04329 127 aa2.52□□□□□ -2.01
CDC8YJR057W YLR236CA0A023PZG4 107 aa2.51□□□□□ -2.01
CDC8YJR057W YBL039W-BP0C268 59 aa2.51□□□□□ -2.01
CDC8YJR057W ATX1P38636 73 aa2.51□□□□□ -2.01
CDC8YJR057W SNA2P56508 79 aa2.51□□□□□ -2.01
CDC8YJR057W RUB1Q03919 77 aa2.51□□□□□ -2.01
CDC8YJR057W YPL257WQ08974 193 aa2.51□□□□□ -2.01
CDC8YJR057W SLO1Q3E784 85 aa2.51□□□□□ -2.01
CDC8YJR057W INO4P13902 151 aa2.49□□□□□ -2.01
CDC8YJR057W UBC4P15731 148 aa2.49□□□□□ -2.01
CDC8YJR057W MSA2P36157 363 aa2.49□□□□□ -2.01
CDC8YJR057W SMP1P38128 452 aa2.49□□□□□ -2.01
CDC8YJR057W YPR195CQ06594 109 aa2.49□□□□□ -2.01
CDC8YJR057W PBI2P0CT04 75 aaKnown RBP2.48□□□□□ -2.01
CDC8YJR057W MPC3P53311 146 aa2.48□□□□□ -2.01
CDC8YJR057W YDR029WQ12111 104 aa2.48□□□□□ -2.01
CDC8YJR057W Q0032Q9ZZX7 96 aa2.48□□□□□ -2.01
CDC8YJR057W RPL26AP05743 127 aaKnown RBP2.47□□□□□ -2.01
CDC8YJR057W YJR107C-AP0CT86 78 aa2.47□□□□□ -2.01
CDC8YJR057W YCR085WP25650 117 aa2.47□□□□□ -2.01
CDC8YJR057W PEX22P39718 180 aa2.47□□□□□ -2.01
CDC8YJR057W RPL26BP53221 127 aaKnown RBP2.47□□□□□ -2.01
CDC8YJR057W YGL041C-BQ3E750 60 aa2.47□□□□□ -2.01
CDC8YJR057W YLR307C-AQ3E825 87 aa2.47□□□□□ -2.01
CDC8YJR057W ISD11Q6Q560 94 aa2.47□□□□□ -2.01
CDC8YJR057W FYV5P25585 152 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms