RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C MVB12P42939 101 aa0.07□□□□□ -2.4
SLX9YGR081C BRP1P53194 125 aa0.07□□□□□ -2.4
SLX9YGR081C GIM3P53900 129 aa0.07□□□□□ -2.4
SLX9YGR081C YHR073W-AP0C5N7 58 aa0.06□□□□□ -2.4
SLX9YGR081C HAP3P13434 144 aa0.06□□□□□ -2.4
SLX9YGR081C GPI11Q06636 219 aa0.06□□□□□ -2.4
SLX9YGR081C YOR034C-AQ3E735 80 aa0.06□□□□□ -2.4
SLX9YGR081C YGL258W-AQ3E740 77 aa0.06□□□□□ -2.4
SLX9YGR081C PCC1Q3E833 88 aa0.06□□□□□ -2.4
SLX9YGR081C SCS22Q6Q595 175 aa0.06□□□□□ -2.4
SLX9YGR081C ENV10Q99382 181 aa0.06□□□□□ -2.4
SLX9YGR081C IMP2P46972 177 aa0.05□□□□□ -2.4
SLX9YGR081C YMR175W-AQ3E766 64 aa0.05□□□□□ -2.4
SLX9YGR081C YGL014C-AP0C5N1 53 aa0.04□□□□□ -2.4
SLX9YGR081C UBI4P0CG63 381 aaKnown RBP0.04□□□□□ -2.4
SLX9YGR081C SEC59P20048 519 aa0.04□□□□□ -2.4
SLX9YGR081C PAM16P42949 149 aa0.04□□□□□ -2.4
SLX9YGR081C YPR153WQ06537 140 aa0.04□□□□□ -2.4
SLX9YGR081C YLR053CQ12026 108 aa0.04□□□□□ -2.4
SLX9YGR081C YNL042W-BQ3E7Z2 85 aa0.04□□□□□ -2.4
SLX9YGR081C MRP49P32388 137 aa0.03□□□□□ -2.4
SLX9YGR081C IRC21Q04772 201 aa0.03□□□□□ -2.4
SLX9YGR081C FPR2P32472 135 aa0.02□□□□□ -2.41
SLX9YGR081C UTP11P34247 250 aaPredicted RBP0.02□□□□□ -2.41
SLX9YGR081C EST3Q03096 181 aa0.02□□□□□ -2.41
SLX9YGR081C YKL018C-AQ3E7A7 99 aa0.02□□□□□ -2.41
SLX9YGR081C YLR365WQ7LIF2 110 aa0.02□□□□□ -2.41
SLX9YGR081C NHP6AP11632 93 aaKnown RBP0.01□□□□□ -2.41
SLX9YGR081C SPI1P40092 148 aa0.01□□□□□ -2.41
SLX9YGR081C YPR108W-AQ3E7B3 70 aa0.01□□□□□ -2.41
SLX9YGR081C HUG1Q6Q5K6 68 aa0.01□□□□□ -2.41
SLX9YGR081C DDR2P89113 61 aa0□□□□□ -2.41
SLX9YGR081C DYN2Q02647 92 aa0□□□□□ -2.41
SLX9YGR081C YDR042CQ03205 200 aa0□□□□□ -2.41
SLX9YGR081C TLG1Q03322 224 aa0□□□□□ -2.41
SLX9YGR081C YBR200W-AQ3E755 54 aa0□□□□□ -2.41
SLX9YGR081C AIM4P38305 123 aaPredicted RBP-0.01□□□□□ -2.41
SLX9YGR081C SHU1P38751 150 aa-0.01□□□□□ -2.41
SLX9YGR081C YMR122CQ03879 124 aa-0.01□□□□□ -2.41
SLX9YGR081C YLR118CQ12354 227 aa-0.01□□□□□ -2.41
SLX9YGR081C COA6Q3E846 104 aa-0.01□□□□□ -2.41
SLX9YGR081C PDX3P38075 228 aaKnown RBP-0.02□□□□□ -2.41
SLX9YGR081C SFT2P38166 215 aa-0.02□□□□□ -2.41
SLX9YGR081C YER181CP40097 107 aa-0.02□□□□□ -2.41
SLX9YGR081C SLM6P38343 150 aa-0.03□□□□□ -2.41
SLX9YGR081C YGL204CP53089 101 aa-0.03□□□□□ -2.41
SLX9YGR081C ATP19P81451 68 aa-0.03□□□□□ -2.41
SLX9YGR081C YAR029WP39549 74 aa-0.04□□□□□ -2.42
SLX9YGR081C VMA10P48836 114 aaKnown RBP-0.04□□□□□ -2.42
SLX9YGR081C YBL039W-BP0C268 59 aa-0.05□□□□□ -2.42
SLX9YGR081C MOG1P47123 218 aa-0.05□□□□□ -2.42
SLX9YGR081C NSL1Q12143 216 aa-0.05□□□□□ -2.42
SLX9YGR081C QCR2P07257 368 aa-0.06□□□□□ -2.42
SLX9YGR081C IPI1P38803 334 aaPredicted RBP-0.06□□□□□ -2.42
SLX9YGR081C COF1Q03048 143 aaKnown RBP-0.06□□□□□ -2.42
SLX9YGR081C MAK3Q03503 176 aa-0.06□□□□□ -2.42
SLX9YGR081C GIM5Q04493 163 aa-0.06□□□□□ -2.42
SLX9YGR081C SPC2Q04969 178 aa-0.06□□□□□ -2.42
SLX9YGR081C FRQ1Q06389 190 aa-0.06□□□□□ -2.42
SLX9YGR081C COX9P07255 59 aa-0.07□□□□□ -2.42
SLX9YGR081C SCP1Q08873 200 aa-0.07□□□□□ -2.42
SLX9YGR081C YLR255CO13574 117 aa-0.08□□□□□ -2.42
SLX9YGR081C YLR157W-DP0CE99 70 aa-0.08□□□□□ -2.42
SLX9YGR081C MRPL31P14063 131 aaPredicted RBP-0.08□□□□□ -2.42
SLX9YGR081C FUN14P18411 198 aa-0.08□□□□□ -2.42
SLX9YGR081C FYV5P25585 152 aa-0.08□□□□□ -2.42
SLX9YGR081C LSM2P38203 95 aaKnown RBP-0.08□□□□□ -2.42
SLX9YGR081C YCL001W-AP87012 153 aa-0.08□□□□□ -2.42
SLX9YGR081C YHR050W-AQ05451 56 aa-0.08□□□□□ -2.42
SLX9YGR081C YAL065CO13511 128 aa-0.09□□□□□ -2.42
SLX9YGR081C PAU19P0CE85 124 aa-0.1□□□□□ -2.43
SLX9YGR081C PAU21P0CE86 164 aa-0.1□□□□□ -2.43
SLX9YGR081C PAU22P0CE87 164 aa-0.1□□□□□ -2.43
SLX9YGR081C PAU3P25610 124 aa-0.1□□□□□ -2.43
SLX9YGR081C PAU15P40585 124 aa-0.1□□□□□ -2.43
SLX9YGR081C MIC27P50945 234 aa-0.1□□□□□ -2.43
SLX9YGR081C YLR342W-AQ3E810 57 aa-0.1□□□□□ -2.43
SLX9YGR081C VMA7P39111 118 aa-0.11□□□□□ -2.43
SLX9YGR081C PAU12P53343 120 aa-0.11□□□□□ -2.43
SLX9YGR081C BSC4P53841 131 aa-0.11□□□□□ -2.43
SLX9YGR081C YNL190WP53872 204 aa-0.11□□□□□ -2.43
SLX9YGR081C YKL023C-AQ2V2P3 75 aa-0.11□□□□□ -2.43
SLX9YGR081C HSP12P22943 109 aaKnown RBP-0.12□□□□□ -2.43
SLX9YGR081C YER187WP40102 141 aa-0.12□□□□□ -2.43
SLX9YGR081C YOL097W-AQ3E7Y9 61 aa-0.12□□□□□ -2.43
SLX9YGR081C RPS28BP0C0X0 67 aaKnown RBP-0.13□□□□□ -2.43
SLX9YGR081C AIM11P87275 137 aa-0.13□□□□□ -2.43
SLX9YGR081C TVP18Q04767 167 aa-0.13□□□□□ -2.43
SLX9YGR081C POC4Q12245 148 aaPredicted RBP-0.13□□□□□ -2.43
SLX9YGR081C DAD1Q12248 94 aa-0.13□□□□□ -2.43
SLX9YGR081C RPS28AQ3E7X9 67 aaPredicted RBP-0.13□□□□□ -2.43
SLX9YGR081C PAU2P32612 120 aa-0.14□□□□□ -2.43
SLX9YGR081C PAU16P35994 123 aa-0.14□□□□□ -2.43
SLX9YGR081C PAU24P38155 120 aa-0.14□□□□□ -2.43
SLX9YGR081C AME1P38313 324 aa-0.14□□□□□ -2.43
SLX9YGR081C MRP17P28778 131 aa-0.15□□□□□ -2.43
SLX9YGR081C PBI2P0CT04 75 aaKnown RBP-0.16□□□□□ -2.44
SLX9YGR081C SOM1Q05676 74 aa-0.16□□□□□ -2.44
SLX9YGR081C ATP14Q12349 124 aa-0.16□□□□□ -2.44
SLX9YGR081C CMC2Q3E7A4 109 aa-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms