RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W COX14P39103 70 aa4.62□□□□□ -1.67
NUP49YGL172W YPL073CP40323 161 aa4.62□□□□□ -1.67
NUP49YGL172W LSM8P47093 109 aaKnown RBP4.62□□□□□ -1.67
NUP49YGL172W PPT2Q12036 173 aa4.62□□□□□ -1.67
NUP49YGL172W YEL067CP39978 195 aa4.61□□□□□ -1.67
NUP49YGL172W VTC1P40046 129 aaRIP-Chip data4.61□□□□□ -1.67not detected
NUP49YGL172W YAR1P46683 200 aa4.61□□□□□ -1.67
NUP49YGL172W YDR029WQ12111 104 aa4.61□□□□□ -1.67
NUP49YGL172W FYV7Q12247 151 aa4.61□□□□□ -1.67
NUP49YGL172W YPL229WQ99395 206 aa4.61□□□□□ -1.67
NUP49YGL172W RPL28P02406 149 aaKnown RBP4.6□□□□□ -1.67
NUP49YGL172W ADH1P00330 348 aaKnown RBP4.59□□□□□ -1.67
NUP49YGL172W QCR8P08525 94 aa4.58□□□□□ -1.68
NUP49YGL172W RPF1P38805 295 aaKnown RBP4.58□□□□□ -1.68
NUP49YGL172W MRPS12P53732 153 aa4.58□□□□□ -1.68
NUP49YGL172W YDL241WQ07738 123 aa4.58□□□□□ -1.68
NUP49YGL172W IGO2Q9P305 131 aa4.58□□□□□ -1.68
NUP49YGL172W SCM4P32564 187 aa4.57□□□□□ -1.68
NUP49YGL172W YNR077CP53758 84 aa4.57□□□□□ -1.68
NUP49YGL172W YNL190WP53872 204 aa4.57□□□□□ -1.68
NUP49YGL172W SMD1Q02260 146 aaPredicted RBP4.57□□□□□ -1.68
NUP49YGL172W ATP5P09457 212 aa4.56□□□□□ -1.68
NUP49YGL172W AQY2P0CD90 149 aa4.56□□□□□ -1.68
NUP49YGL172W SMP1P38128 452 aa4.56□□□□□ -1.68
NUP49YGL172W OXA1P39952 402 aa4.56□□□□□ -1.68
NUP49YGL172W GIS2P53849 153 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
NUP49YGL172W HAP3P13434 144 aa4.55□□□□□ -1.68
NUP49YGL172W YFR057WP43625 151 aa4.55□□□□□ -1.68
NUP49YGL172W ABF2Q02486 183 aa4.55□□□□□ -1.68
NUP49YGL172W UGX2P32772 223 aa4.55□□□□□ -1.68
NUP49YGL172W CWP2P43497 92 aa4.55□□□□□ -1.68
NUP49YGL172W PEX22P39718 180 aa4.54□□□□□ -1.68
NUP49YGL172W MID2P36027 376 aa4.53□□□□□ -1.68
NUP49YGL172W MVB12P42939 101 aa4.53□□□□□ -1.68
NUP49YGL172W SAE3P89114 91 aa4.53□□□□□ -1.68
NUP49YGL172W YPL080CQ02826 108 aa4.53□□□□□ -1.68
NUP49YGL172W YML079WQ03629 201 aa4.53□□□□□ -1.68
NUP49YGL172W YDL085C-AQ3E7B7 68 aaKnown RBP4.53□□□□□ -1.68
NUP49YGL172W YLL006W-AQ3E814 58 aa4.53□□□□□ -1.68
NUP49YGL172W MBF1O14467 151 aaKnown RBP4.52□□□□□ -1.69
NUP49YGL172W YGL041C-BQ3E750 60 aa4.52□□□□□ -1.69
NUP49YGL172W ECM12O13529 151 aa4.51□□□□□ -1.69
NUP49YGL172W YBL039W-BP0C268 59 aa4.51□□□□□ -1.69
NUP49YGL172W YFL019CP43576 117 aa4.51□□□□□ -1.69
NUP49YGL172W PAU23Q07987 124 aa4.51□□□□□ -1.69
NUP49YGL172W PAU17Q12370 124 aa4.51□□□□□ -1.69
NUP49YGL172W Q0032Q9ZZX7 96 aa4.51□□□□□ -1.69
NUP49YGL172W ELC1Q03071 99 aa4.5□□□□□ -1.69
NUP49YGL172W YLR307C-AQ3E825 87 aa4.5□□□□□ -1.69
NUP49YGL172W RPS28BP0C0X0 67 aaKnown RBP4.49□□□□□ -1.69
NUP49YGL172W YBR121C-AP0C5L4 52 aa4.49□□□□□ -1.69
NUP49YGL172W HPA2Q06592 156 aa4.49□□□□□ -1.69
NUP49YGL172W RPS28AQ3E7X9 67 aaPredicted RBP4.49□□□□□ -1.69
NUP49YGL172W IGD1P43598 195 aa4.48□□□□□ -1.69
NUP49YGL172W LCL1Q02786 101 aa4.48□□□□□ -1.69
NUP49YGL172W AIM19P40502 157 aa4.47□□□□□ -1.69
NUP49YGL172W YIA6P40556 373 aa4.47□□□□□ -1.69
NUP49YGL172W YLR363W-AQ3E747 85 aa4.47□□□□□ -1.69
NUP49YGL172W YKL183C-AQ3E765 70 aa4.47□□□□□ -1.69
NUP49YGL172W RPL29P05747 59 aaPredicted RBP4.46□□□□□ -1.69
NUP49YGL172W GLC8P41818 229 aa4.46□□□□□ -1.7
NUP49YGL172W CWC27Q02770 301 aa4.46□□□□□ -1.7
NUP49YGL172W RUB1Q03919 77 aa4.46□□□□□ -1.7
NUP49YGL172W YLR361C-AQ3E795 98 aa4.46□□□□□ -1.7
NUP49YGL172W ARO2P28777 376 aaKnown RBP4.45□□□□□ -1.7
NUP49YGL172W MMS2P53152 137 aa4.45□□□□□ -1.7
NUP49YGL172W RGM1Q00453 211 aa4.45□□□□□ -1.7
NUP49YGL172W KNH1P50112 268 aa4.44□□□□□ -1.7
NUP49YGL172W YOR020W-AQ3E824 90 aa4.44□□□□□ -1.7
NUP49YGL172W UBC4P15731 148 aa4.43□□□□□ -1.7
NUP49YGL172W COX10P21592 462 aa4.43□□□□□ -1.7
NUP49YGL172W YER181CP40097 107 aa4.43□□□□□ -1.7
NUP49YGL172W YNL162W-AQ3E7A8 72 aa4.43□□□□□ -1.7
NUP49YGL172W PAI3P01094 68 aa4.42□□□□□ -1.7
NUP49YGL172W YHR130CP38834 111 aa4.42□□□□□ -1.7
NUP49YGL172W YGL193CP53097 103 aa4.42□□□□□ -1.7
NUP49YGL172W IRC21Q04772 201 aa4.42□□□□□ -1.7
NUP49YGL172W YKL023C-AQ2V2P3 75 aa4.42□□□□□ -1.7
NUP49YGL172W YOR304C-AO14468 76 aa4.41□□□□□ -1.7
NUP49YGL172W CPR1P14832 162 aaKnown RBP4.41□□□□□ -1.7
NUP49YGL172W RPL26AP05743 127 aaKnown RBP4.4□□□□□ -1.7
NUP49YGL172W RPL26BP53221 127 aaKnown RBP4.4□□□□□ -1.7
NUP49YGL172W YOR034C-AQ3E735 80 aa4.4□□□□□ -1.7
NUP49YGL172W NHP2P32495 156 aaPredicted RBP4.39□□□□□ -1.71
NUP49YGL172W ICY1Q04329 127 aa4.39□□□□□ -1.71
NUP49YGL172W YLR296WQ05898 108 aa4.38□□□□□ -1.71
NUP49YGL172W DDR48P18899 430 aaKnown RBP4.38□□□□□ -1.71
NUP49YGL172W YFL067WP43537 175 aa4.38□□□□□ -1.71
NUP49YGL172W LSM6Q06406 86 aaKnown RBP4.38□□□□□ -1.71
NUP49YGL172W MHR1Q06630 226 aa4.38□□□□□ -1.71
NUP49YGL172W SLO1Q3E784 85 aa4.38□□□□□ -1.71
NUP49YGL172W SPT4P32914 102 aaPredicted RBP4.37□□□□□ -1.71
NUP49YGL172W YPL257WQ08974 193 aa4.37□□□□□ -1.71
NUP49YGL172W YBL112CQ3E7Y4 105 aa4.37□□□□□ -1.71
NUP49YGL172W YNL042W-BQ3E7Z2 85 aa4.37□□□□□ -1.71
NUP49YGL172W YBR230W-AQ3E762 66 aa4.36□□□□□ -1.71
NUP49YGL172W YJL127C-BQ3E828 52 aa4.36□□□□□ -1.71
NUP49YGL172W YER039C-AP0CD97 72 aa4.35□□□□□ -1.71
NUP49YGL172W MRPL24P36525 258 aaPredicted RBP4.35□□□□□ -1.71
NUP49YGL172W HUR1P45820 110 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms