RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	QCR8	P08525	94 aa		5.06	□□□□□ -1.6
SKP1	YDR328C	YPR170W-B	P0C5R9	85 aa		5.06	□□□□□ -1.6
SKP1	YDR328C	YBL081W	P38180	368 aa	Known RBP	5.06	□□□□□ -1.6
SKP1	YDR328C	RPF1	P38805	295 aa	Known RBP	5.06	□□□□□ -1.6
SKP1	YDR328C	SLO1	Q3E784	85 aa		5.06	□□□□□ -1.6
SKP1	YDR328C	YOR304C-A	O14468	76 aa		5.05	□□□□□ -1.6
SKP1	YDR328C	RPL28	P02406	149 aa	Known RBP	5.05	□□□□□ -1.6
SKP1	YDR328C	TOA2	P32774	122 aa		5.05	□□□□□ -1.6
SKP1	YDR328C	YAL064W	P39711	94 aa		5.04	□□□□□ -1.6
SKP1	YDR328C	OXA1	P39952	402 aa		5.04	□□□□□ -1.6
SKP1	YDR328C	YFR057W	P43625	151 aa		5.04	□□□□□ -1.6
SKP1	YDR328C	YDL241W	Q07738	123 aa		5.04	□□□□□ -1.6
SKP1	YDR328C	PPT2	Q12036	173 aa		5.04	□□□□□ -1.6
SKP1	YDR328C	ADH1	P00330	348 aa	Known RBP	5.03	□□□□□ -1.6
SKP1	YDR328C	RPL11A	P0C0W9	174 aa	Known RBP	5.03	□□□□□ -1.6
SKP1	YDR328C	UGX2	P32772	223 aa		5.03	□□□□□ -1.6
SKP1	YDR328C	EOS1	P53938	366 aa		5.03	□□□□□ -1.6
SKP1	YDR328C	YPR195C	Q06594	109 aa		5.03	□□□□□ -1.6
SKP1	YDR328C	YLR363W-A	Q3E747	85 aa		5.03	□□□□□ -1.6
SKP1	YDR328C	RPL11B	Q3E757	174 aa	Predicted RBP	5.03	□□□□□ -1.6
SKP1	YDR328C	YNL190W	P53872	204 aa		5.02	□□□□□ -1.61
SKP1	YDR328C	YAR023C	D6VPM8	179 aa		5.01	□□□□□ -1.61
SKP1	YDR328C	CWP2	P43497	92 aa		5.01	□□□□□ -1.61
SKP1	YDR328C	YNL184C	P53876	108 aa		5.01	□□□□□ -1.61
SKP1	YDR328C	ELC1	Q03071	99 aa		5.01	□□□□□ -1.61
SKP1	YDR328C	YML079W	Q03629	201 aa		5	□□□□□ -1.61
SKP1	YDR328C	YIR021W-A	Q3E739	70 aa		5	□□□□□ -1.61
SKP1	YDR328C	MBF1	O14467	151 aa	Known RBP	4.99	□□□□□ -1.61
SKP1	YDR328C	UBC11	P52492	156 aa		4.98	□□□□□ -1.61
SKP1	YDR328C	CDC43	P18898	376 aa		4.97	□□□□□ -1.61
SKP1	YDR328C	ANB1	P19211	157 aa		4.97	□□□□□ -1.61
SKP1	YDR328C	YLR296W	Q05898	108 aa		4.97	□□□□□ -1.61
SKP1	YDR328C	YKL023C-A	Q2V2P3	75 aa		4.97	□□□□□ -1.61
SKP1	YDR328C	PAI3	P01094	68 aa		4.96	□□□□□ -1.62
SKP1	YDR328C	MID2	P36027	376 aa		4.96	□□□□□ -1.62
SKP1	YDR328C	YLR361C-A	Q3E795	98 aa		4.96	□□□□□ -1.62
SKP1	YDR328C	YLL006W-A	Q3E814	58 aa		4.96	□□□□□ -1.62
SKP1	YDR328C	YPL229W	Q99395	206 aa		4.96	□□□□□ -1.62
SKP1	YDR328C	AQY2	P0CD90	149 aa		4.95	□□□□□ -1.62
SKP1	YDR328C	YER181C	P40097	107 aa		4.95	□□□□□ -1.62
SKP1	YDR328C	MVB12	P42939	101 aa		4.95	□□□□□ -1.62
SKP1	YDR328C	SNA2	P56508	79 aa		4.95	□□□□□ -1.62
SKP1	YDR328C	MRP10	O75012	95 aa		4.94	□□□□□ -1.62
SKP1	YDR328C	SMD1	Q02260	146 aa	Predicted RBP	4.94	□□□□□ -1.62
SKP1	YDR328C	ABF2	Q02486	183 aa		4.94	□□□□□ -1.62
SKP1	YDR328C	RPL29	P05747	59 aa	Predicted RBP	4.93	□□□□□ -1.62
SKP1	YDR328C	YIA6	P40556	373 aa		4.93	□□□□□ -1.62
SKP1	YDR328C	RGM1	Q00453	211 aa		4.93	□□□□□ -1.62
SKP1	YDR328C	HPA2	Q06592	156 aa		4.93	□□□□□ -1.62
SKP1	YDR328C	YDR029W	Q12111	104 aa		4.93	□□□□□ -1.62
SKP1	YDR328C	YDR034C-A	P0C289	58 aa		4.92	□□□□□ -1.62
SKP1	YDR328C	SMP1	P38128	452 aa		4.92	□□□□□ -1.62
SKP1	YDR328C	YFL019C	P43576	117 aa		4.92	□□□□□ -1.62
SKP1	YDR328C	YOR020W-A	Q3E824	90 aa		4.92	□□□□□ -1.62
SKP1	YDR328C	YBL039W-B	P0C268	59 aa		4.91	□□□□□ -1.62
SKP1	YDR328C	YIL102C-A	Q2V2P5	75 aa		4.91	□□□□□ -1.62
SKP1	YDR328C	YHR130C	P38834	111 aa		4.9	□□□□□ -1.63
SKP1	YDR328C	GAT4	P40569	121 aa		4.9	□□□□□ -1.63
SKP1	YDR328C	LSM6	Q06406	86 aa	Known RBP	4.9	□□□□□ -1.63
SKP1	YDR328C	LCL2	Q08045	131 aa		4.9	□□□□□ -1.63
SKP1	YDR328C	MRPL24	P36525	258 aa	Predicted RBP	4.89	□□□□□ -1.63
SKP1	YDR328C	AIM19	P40502	157 aa		4.89	□□□□□ -1.63
SKP1	YDR328C	IGD1	P43598	195 aa		4.89	□□□□□ -1.63
SKP1	YDR328C	COX10	P21592	462 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	NHP2	P32495	156 aa	Predicted RBP	4.88	□□□□□ -1.63
SKP1	YDR328C	PEX22	P39718	180 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	YNL198C	P40166	100 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	KNH1	P50112	268 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	ISU2	Q12056	156 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	YGL041C-B	Q3E750	60 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	ISD11	Q6Q560	94 aa		4.88	□□□□□ -1.63
SKP1	YDR328C	MDN1	Q12019	4910 aa	Known RBP	4.88	□□□□□ -1.63
SKP1	YDR328C	ECM12	O13529	151 aa		4.87	□□□□□ -1.63
SKP1	YDR328C	YNL162W-A	Q3E7A8	72 aa		4.87	□□□□□ -1.63
SKP1	YDR328C	UBC4	P15731	148 aa		4.86	□□□□□ -1.63
SKP1	YDR328C	ICY1	Q04329	127 aa		4.86	□□□□□ -1.63
SKP1	YDR328C	IRC21	Q04772	201 aa		4.86	□□□□□ -1.63
SKP1	YDR328C	DUT1	P33317	147 aa		4.85	□□□□□ -1.63
SKP1	YDR328C	Q0032	Q9ZZX7	96 aa		4.85	□□□□□ -1.63
SKP1	YDR328C	YLR307C-A	Q3E825	87 aa		4.84	□□□□□ -1.63
SKP1	YDR328C	INO4	P13902	151 aa		4.83	□□□□□ -1.64
SKP1	YDR328C	HYP2	P23301	157 aa	Known RBP	4.83	□□□□□ -1.64
SKP1	YDR328C	MET32	Q12041	191 aa		4.83	□□□□□ -1.64
SKP1	YDR328C	YOR034C-A	Q3E735	80 aa		4.83	□□□□□ -1.64
SKP1	YDR328C	YFL065C	P43539	102 aa		4.82	□□□□□ -1.64
SKP1	YDR328C	YGL193C	P53097	103 aa		4.82	□□□□□ -1.64
SKP1	YDR328C	YPR203W	Q08994	102 aa		4.82	□□□□□ -1.64
SKP1	YDR328C	YLR236C	A0A023PZG4	107 aa		4.81	□□□□□ -1.64
SKP1	YDR328C	RPS28B	P0C0X0	67 aa	Known RBP	4.81	□□□□□ -1.64
SKP1	YDR328C	HUR1	P45820	110 aa		4.81	□□□□□ -1.64
SKP1	YDR328C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.81	□□□□□ -1.64
SKP1	YDR328C	RPL26A	P05743	127 aa	Known RBP	4.8	□□□□□ -1.64
SKP1	YDR328C	RPL26B	P53221	127 aa	Known RBP	4.8	□□□□□ -1.64
SKP1	YDR328C	YBR121C-A	P0C5L4	52 aa		4.79	□□□□□ -1.64
SKP1	YDR328C	MSA2	P36157	363 aa		4.79	□□□□□ -1.64
SKP1	YDR328C	LCL1	Q02786	101 aa		4.78	□□□□□ -1.64
SKP1	YDR328C	YBR230W-A	Q3E762	66 aa		4.78	□□□□□ -1.64
SKP1	YDR328C	ATX1	P38636	73 aa		4.77	□□□□□ -1.65
SKP1	YDR328C	YNL042W-B	Q3E7Z2	85 aa		4.77	□□□□□ -1.65
SKP1	YDR328C	FYV5	P25585	152 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms