RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W RPR2P40571 144 aa1.19□□□□□ -2.22
CFT1YDR301W YLR296WQ05898 108 aa1.19□□□□□ -2.22
CFT1YDR301W YIL134C-AQ45U18 67 aa1.19□□□□□ -2.22
CFT1YDR301W HAP3P13434 144 aa1.18□□□□□ -2.22
CFT1YDR301W AIM11P87275 137 aa1.18□□□□□ -2.22
CFT1YDR301W IGO2Q9P305 131 aa1.18□□□□□ -2.22
CFT1YDR301W HMRA2P0CY13 119 aa1.18□□□□□ -2.22
CFT1YDR301W EDC2P40023 145 aaPredicted RBP1.18□□□□□ -2.22
CFT1YDR301W MMS2P53152 137 aa1.18□□□□□ -2.22
CFT1YDR301W YKR041WP36134 250 aa1.18□□□□□ -2.22
CFT1YDR301W YBR219CP38317 127 aa1.18□□□□□ -2.22
CFT1YDR301W WIP1Q2V2P8 89 aa1.18□□□□□ -2.22
CFT1YDR301W YPR014CQ6B0W2 109 aa1.18□□□□□ -2.22
CFT1YDR301W YCR043CP25361 127 aa1.17□□□□□ -2.22
CFT1YDR301W YRA2P36036 203 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
CFT1YDR301W YGL034CP53186 121 aa1.17□□□□□ -2.22
CFT1YDR301W YMR295CQ03559 197 aa1.17□□□□□ -2.22
CFT1YDR301W YNR077CP53758 84 aa1.17□□□□□ -2.22
CFT1YDR301W FUN14P18411 198 aa1.17□□□□□ -2.22
CFT1YDR301W MRPL11P36521 249 aaPredicted RBP1.17□□□□□ -2.22
CFT1YDR301W MSL1P40567 111 aaPredicted RBP1.17□□□□□ -2.22
CFT1YDR301W YLR307C-AQ3E825 87 aa1.17□□□□□ -2.22
CFT1YDR301W YCL021W-AQ96VH3 125 aa1.17□□□□□ -2.22
CFT1YDR301W YDL022C-AP0C5L6 82 aa1.16□□□□□ -2.22
CFT1YDR301W YEL067CP39978 195 aa1.16□□□□□ -2.22
CFT1YDR301W YIL059CP40520 121 aa1.16□□□□□ -2.22
CFT1YDR301W IGD1P43598 195 aa1.16□□□□□ -2.22
CFT1YDR301W YNL190WP53872 204 aa1.16□□□□□ -2.22
CFT1YDR301W SAE3P89114 91 aa1.16□□□□□ -2.22
CFT1YDR301W SVP26P38869 228 aa1.16□□□□□ -2.22
CFT1YDR301W VTC1P40046 129 aaRIP-Chip data1.16□□□□□ -2.22not detected
CFT1YDR301W SEN15Q04675 128 aa1.16□□□□□ -2.22
CFT1YDR301W ATP15P21306 62 aa1.16□□□□□ -2.22
CFT1YDR301W OXA1P39952 402 aa1.16□□□□□ -2.22
CFT1YDR301W CIN5P40917 295 aa1.16□□□□□ -2.22
CFT1YDR301W CWP2P43497 92 aa1.16□□□□□ -2.22
CFT1YDR301W YML079WQ03629 201 aa1.16□□□□□ -2.22
CFT1YDR301W YPL261CQ08976 102 aa1.16□□□□□ -2.22
CFT1YDR301W YER078W-AQ3E7A2 54 aa1.16□□□□□ -2.22
CFT1YDR301W UTP20P35194 2493 aaKnown RBP1.16□□□□□ -2.22
CFT1YDR301W ADH1P00330 348 aaKnown RBP1.15□□□□□ -2.22
CFT1YDR301W YLR412C-AQ3E742 68 aa1.15□□□□□ -2.22
CFT1YDR301W SCS22Q6Q595 175 aa1.15□□□□□ -2.22
CFT1YDR301W UBC4P15731 148 aa1.15□□□□□ -2.23
CFT1YDR301W UGX2P32772 223 aa1.15□□□□□ -2.23
CFT1YDR301W CWC27Q02770 301 aa1.15□□□□□ -2.23
CFT1YDR301W YBL008W-AQ3E821 79 aa1.15□□□□□ -2.23
CFT1YDR301W YBL039W-BP0C268 59 aa1.15□□□□□ -2.23
CFT1YDR301W YFL019CP43576 117 aa1.15□□□□□ -2.23
CFT1YDR301W YLR363W-AQ3E747 85 aa1.15□□□□□ -2.23
CFT1YDR301W YGL041C-BQ3E750 60 aa1.15□□□□□ -2.23
CFT1YDR301W YBL081WP38180 368 aaKnown RBP1.15□□□□□ -2.23
CFT1YDR301W RPF1P38805 295 aaKnown RBP1.15□□□□□ -2.23
CFT1YDR301W YJR085CP47131 105 aaKnown RBP1.15□□□□□ -2.23
CFT1YDR301W NAT5Q08689 176 aa1.15□□□□□ -2.23
CFT1YDR301W YLR236CA0A023PZG4 107 aa1.14□□□□□ -2.23
CFT1YDR301W YPR170W-BP0C5R9 85 aa1.14□□□□□ -2.23
CFT1YDR301W COX10P21592 462 aa1.14□□□□□ -2.23
CFT1YDR301W MID2P36027 376 aa1.14□□□□□ -2.23
CFT1YDR301W SKI6P46948 246 aaPredicted RBP1.14□□□□□ -2.23
CFT1YDR301W OST2P46964 130 aa1.14□□□□□ -2.23
CFT1YDR301W RGM1Q00453 211 aa1.14□□□□□ -2.23
CFT1YDR301W ICY1Q04329 127 aa1.14□□□□□ -2.23
CFT1YDR301W YER039C-AP0CD97 72 aa1.14□□□□□ -2.23
CFT1YDR301W YGL193CP53097 103 aa1.14□□□□□ -2.23
CFT1YDR301W YLL006W-AQ3E814 58 aa1.14□□□□□ -2.23
CFT1YDR301W ECM12O13529 151 aa1.14□□□□□ -2.23
CFT1YDR301W AQY2P0CD90 149 aa1.14□□□□□ -2.23
CFT1YDR301W MVB12P42939 101 aa1.14□□□□□ -2.23
CFT1YDR301W SFT1P43682 97 aa1.14□□□□□ -2.23
CFT1YDR301W YGL088WP53151 121 aa1.14□□□□□ -2.23
CFT1YDR301W YIL102C-AQ2V2P5 75 aa1.14□□□□□ -2.23
CFT1YDR301W YBR209WP38311 105 aa1.13□□□□□ -2.23
CFT1YDR301W BET1P22804 142 aa1.13□□□□□ -2.23
CFT1YDR301W YHR130CP38834 111 aa1.13□□□□□ -2.23
CFT1YDR301W YAL064WP39711 94 aa1.13□□□□□ -2.23
CFT1YDR301W YNL184CP53876 108 aa1.13□□□□□ -2.23
CFT1YDR301W LSM6Q06406 86 aaKnown RBP1.13□□□□□ -2.23
CFT1YDR301W YDR029WQ12111 104 aa1.13□□□□□ -2.23
CFT1YDR301W YAR023CD6VPM8 179 aa1.13□□□□□ -2.23
CFT1YDR301W RPS28BP0C0X0 67 aaKnown RBP1.13□□□□□ -2.23
CFT1YDR301W YPT53P36019 220 aa1.13□□□□□ -2.23
CFT1YDR301W MSA2P36157 363 aa1.13□□□□□ -2.23
CFT1YDR301W YER181CP40097 107 aa1.13□□□□□ -2.23
CFT1YDR301W YGR039WP53225 103 aa1.13□□□□□ -2.23
CFT1YDR301W ELC1Q03071 99 aa1.13□□□□□ -2.23
CFT1YDR301W SHH4Q06236 168 aa1.13□□□□□ -2.23
CFT1YDR301W RPS28AQ3E7X9 67 aaPredicted RBP1.13□□□□□ -2.23
CFT1YDR301W GAT4P40569 121 aa1.12□□□□□ -2.23
CFT1YDR301W LCL1Q02786 101 aa1.12□□□□□ -2.23
CFT1YDR301W RPL26AP05743 127 aaKnown RBP1.12□□□□□ -2.23
CFT1YDR301W RPL26BP53221 127 aaKnown RBP1.12□□□□□ -2.23
CFT1YDR301W IRC21Q04772 201 aa1.12□□□□□ -2.23
CFT1YDR301W PAI3P01094 68 aa1.12□□□□□ -2.23
CFT1YDR301W YDR034C-AP0C289 58 aa1.12□□□□□ -2.23
CFT1YDR301W ANB1P19211 157 aa1.12□□□□□ -2.23
CFT1YDR301W SMP1P38128 452 aa1.12□□□□□ -2.23
CFT1YDR301W AIM19P40502 157 aa1.12□□□□□ -2.23
CFT1YDR301W SPG1P50088 95 aa1.12□□□□□ -2.23
CFT1YDR301W HPA2Q06592 156 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms