RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C RPS28BP0C0X0 67 aaKnown RBP3.25□□□□□ -1.89
NUP42YDR192C YNL217WP40152 326 aa3.25□□□□□ -1.89
NUP42YDR192C PEX17P40155 199 aa3.25□□□□□ -1.89
NUP42YDR192C SPC1P46965 94 aa3.25□□□□□ -1.89
NUP42YDR192C RPS28AQ3E7X9 67 aaPredicted RBP3.25□□□□□ -1.89
NUP42YDR192C TAR1Q8TGM6 124 aa3.25□□□□□ -1.89
NUP42YDR192C IGO2Q9P305 131 aa3.25□□□□□ -1.89
NUP42YDR192C RPF1P38805 295 aaKnown RBP3.24□□□□□ -1.89
NUP42YDR192C YFR035CP43608 114 aa3.24□□□□□ -1.89
NUP42YDR192C YGR025WP53216 100 aa3.24□□□□□ -1.89
NUP42YDR192C ELC1Q03071 99 aa3.24□□□□□ -1.89
NUP42YDR192C RPL28P02406 149 aaKnown RBP3.23□□□□□ -1.89
NUP42YDR192C UBC5P15732 148 aa3.23□□□□□ -1.89
NUP42YDR192C PRE1P22141 198 aaKnown RBP3.23□□□□□ -1.89
NUP42YDR192C YIL059CP40520 121 aa3.23□□□□□ -1.89
NUP42YDR192C YMR122W-AQ3E842 84 aa3.23□□□□□ -1.89
NUP42YDR192C ENV10Q99382 181 aa3.23□□□□□ -1.89
NUP42YDR192C ANB1P19211 157 aa3.22□□□□□ -1.89
NUP42YDR192C YBR209WP38311 105 aa3.22□□□□□ -1.89
NUP42YDR192C ARC15P40518 154 aaRIP-Chip data3.22□□□□□ -1.89not detected
NUP42YDR192C YJR146WP47174 117 aa3.22□□□□□ -1.89
NUP42YDR192C COA3Q3E7B2 85 aa3.22□□□□□ -1.89
NUP42YDR192C YCR001WP25347 104 aa3.21□□□□□ -1.9
NUP42YDR192C YKR041WP36134 250 aa3.21□□□□□ -1.9
NUP42YDR192C SHU1P38751 150 aa3.21□□□□□ -1.9
NUP42YDR192C YER181CP40097 107 aa3.21□□□□□ -1.9
NUP42YDR192C YLR194CQ05777 254 aa3.21□□□□□ -1.9
NUP42YDR192C AIM11P87275 137 aa3.2□□□□□ -1.9
NUP42YDR192C YDL241WQ07738 123 aa3.2□□□□□ -1.9
NUP42YDR192C YMR175W-AQ3E766 64 aa3.2□□□□□ -1.9
NUP42YDR192C PAI3P01094 68 aa3.19□□□□□ -1.9
NUP42YDR192C ATP15P21306 62 aa3.19□□□□□ -1.9
NUP42YDR192C NHP2P32495 156 aaPredicted RBP3.19□□□□□ -1.9
NUP42YDR192C YEL008WP40001 126 aa3.19□□□□□ -1.9
NUP42YDR192C YKL023C-AQ2V2P3 75 aa3.19□□□□□ -1.9
NUP42YDR192C MMS2P53152 137 aa3.18□□□□□ -1.9
NUP42YDR192C ABF2Q02486 183 aa3.18□□□□□ -1.9
NUP42YDR192C YPR195CQ06594 109 aa3.18□□□□□ -1.9
NUP42YDR192C RTC6O14464 93 aa3.17□□□□□ -1.9
NUP42YDR192C HYP2P23301 157 aaKnown RBP3.17□□□□□ -1.9
NUP42YDR192C NRG2P38082 220 aa3.17□□□□□ -1.9
NUP42YDR192C YHR130CP38834 111 aa3.17□□□□□ -1.9
NUP42YDR192C YLR296WQ05898 108 aa3.17□□□□□ -1.9
NUP42YDR192C RDS3Q06835 107 aaPredicted RBP3.17□□□□□ -1.9
NUP42YDR192C YIL102C-AQ2V2P5 75 aa3.17□□□□□ -1.9
NUP42YDR192C YOR020W-AQ3E824 90 aa3.17□□□□□ -1.9
NUP42YDR192C ISD11Q6Q560 94 aa3.17□□□□□ -1.9
NUP42YDR192C RPC10P40422 70 aa3.16□□□□□ -1.9
NUP42YDR192C YGL088WP53151 121 aa3.16□□□□□ -1.9
NUP42YDR192C YPL257WQ08974 193 aa3.16□□□□□ -1.9
NUP42YDR192C MBF1O14467 151 aaKnown RBP3.15□□□□□ -1.91
NUP42YDR192C RPL33AP05744 107 aaKnown RBP3.15□□□□□ -1.91
NUP42YDR192C UGX2P32772 223 aa3.15□□□□□ -1.91
NUP42YDR192C RPL33BP41056 107 aaKnown RBP3.15□□□□□ -1.91
NUP42YDR192C LSM6Q06406 86 aaKnown RBP3.15□□□□□ -1.91
NUP42YDR192C YPR170W-BP0C5R9 85 aa3.14□□□□□ -1.91
NUP42YDR192C SVP26P38869 228 aa3.14□□□□□ -1.91
NUP42YDR192C CWP2P43497 92 aa3.14□□□□□ -1.91
NUP42YDR192C YMR295CQ03559 197 aa3.14□□□□□ -1.91
NUP42YDR192C YBL081WP38180 368 aaKnown RBP3.13□□□□□ -1.91
NUP42YDR192C VTC1P40046 129 aaRIP-Chip data3.13□□□□□ -1.91not detected
NUP42YDR192C YMR320WQ04897 101 aa3.13□□□□□ -1.91
NUP42YDR192C YGL041C-BQ3E750 60 aa3.13□□□□□ -1.91
NUP42YDR192C YLR361C-AQ3E795 98 aa3.13□□□□□ -1.91
NUP42YDR192C RPL26AP05743 127 aaKnown RBP3.12□□□□□ -1.91
NUP42YDR192C RPL26BP53221 127 aaKnown RBP3.12□□□□□ -1.91
NUP42YDR192C YNR077CP53758 84 aa3.12□□□□□ -1.91
NUP42YDR192C RGM1Q00453 211 aa3.12□□□□□ -1.91
NUP42YDR192C MRPL24P36525 258 aaPredicted RBP3.11□□□□□ -1.91
NUP42YDR192C MRPS12P53732 153 aa3.11□□□□□ -1.91
NUP42YDR192C YAR023CD6VPM8 179 aa3.1□□□□□ -1.91
NUP42YDR192C YAL065CO13511 128 aa3.1□□□□□ -1.91
NUP42YDR192C YBL039W-BP0C268 59 aa3.1□□□□□ -1.91
NUP42YDR192C AQY2P0CD90 149 aa3.1□□□□□ -1.91
NUP42YDR192C HPA2Q06592 156 aa3.1□□□□□ -1.91
NUP42YDR192C RPL29P05747 59 aaPredicted RBP3.09□□□□□ -1.91
NUP42YDR192C YDL022C-AP0C5L6 82 aa3.09□□□□□ -1.91
NUP42YDR192C MVB12P42939 101 aa3.09□□□□□ -1.91
NUP42YDR192C HUR1P45820 110 aa3.09□□□□□ -1.91
NUP42YDR192C SLO1Q3E784 85 aa3.09□□□□□ -1.91
NUP42YDR192C YCR085WP25650 117 aa3.08□□□□□ -1.92
NUP42YDR192C YBR219CP38317 127 aa3.08□□□□□ -1.92
NUP42YDR192C YFL019CP43576 117 aa3.08□□□□□ -1.92
NUP42YDR192C SFT1P43682 97 aa3.08□□□□□ -1.92
NUP42YDR192C YLL006W-AQ3E814 58 aa3.08□□□□□ -1.92
NUP42YDR192C YRA2P36036 203 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
NUP42YDR192C YEL067CP39978 195 aa3.07□□□□□ -1.92
NUP42YDR192C YJL144WP47009 104 aa3.07□□□□□ -1.92
NUP42YDR192C KNH1P50112 268 aa3.07□□□□□ -1.92
NUP42YDR192C SNA2P56508 79 aa3.07□□□□□ -1.92
NUP42YDR192C ICY1Q04329 127 aa3.07□□□□□ -1.92
NUP42YDR192C YBL112CQ3E7Y4 105 aa3.07□□□□□ -1.92
NUP42YDR192C YBL008W-AQ3E821 79 aa3.07□□□□□ -1.92
NUP42YDR192C PBI2P0CT04 75 aaKnown RBP3.06□□□□□ -1.92
NUP42YDR192C AUA1P32450 94 aa3.06□□□□□ -1.92
NUP42YDR192C ATX1P38636 73 aa3.06□□□□□ -1.92
NUP42YDR192C YAL064WP39711 94 aa3.06□□□□□ -1.92
NUP42YDR192C YNL198CP40166 100 aa3.06□□□□□ -1.92
NUP42YDR192C TSC3Q3E790 80 aa3.06□□□□□ -1.92
NUP42YDR192C YLL066W-BQ8TGJ7 56 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms