RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	HOT13	P36078	116 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	NRG2	P38082	220 aa		3.43	□□□□□ -1.86
SUP35	YDR172W	SHU1	P38751	150 aa		3.42	□□□□□ -1.86
SUP35	YDR172W	YKL023C-A	Q2V2P3	75 aa		3.42	□□□□□ -1.86
SUP35	YDR172W	ANB1	P19211	157 aa		3.42	□□□□□ -1.86
SUP35	YDR172W	YHR130C	P38834	111 aa		3.42	□□□□□ -1.86
SUP35	YDR172W	YBR126W-A	Q8TGU7	68 aa		3.42	□□□□□ -1.86
SUP35	YDR172W	YBR219C	P38317	127 aa		3.41	□□□□□ -1.86
SUP35	YDR172W	PEX17	P40155	199 aa		3.41	□□□□□ -1.86
SUP35	YDR172W	ARC15	P40518	154 aa	RIP-Chip data	3.41	□□□□□ -1.86	not detected
SUP35	YDR172W	YMR295C	Q03559	197 aa		3.41	□□□□□ -1.86
SUP35	YDR172W	YLR281C	Q05863	155 aa		3.41	□□□□□ -1.86
SUP35	YDR172W	ADH1	P00330	348 aa	Known RBP	3.4	□□□□□ -1.86
SUP35	YDR172W	ERG28	P40030	148 aa		3.4	□□□□□ -1.86
SUP35	YDR172W	INO4	P13902	151 aa		3.4	□□□□□ -1.87
SUP35	YDR172W	LSM6	Q06406	86 aa	Known RBP	3.39	□□□□□ -1.87
SUP35	YDR172W	ISD11	Q6Q560	94 aa		3.39	□□□□□ -1.87
SUP35	YDR172W	YGR240C-A	Q3E786	66 aa		3.39	□□□□□ -1.87
SUP35	YDR172W	SGF11	Q03067	99 aa		3.38	□□□□□ -1.87
SUP35	YDR172W	YBL112C	Q3E7Y4	105 aa		3.38	□□□□□ -1.87
SUP35	YDR172W	NHP2	P32495	156 aa	Predicted RBP	3.37	□□□□□ -1.87
SUP35	YDR172W	YFL065C	P43539	102 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	RDS3	Q06835	107 aa	Predicted RBP	3.37	□□□□□ -1.87
SUP35	YDR172W	VAM10	Q08474	114 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	YPR203W	Q08994	102 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	YMR122W-A	Q3E842	84 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	QCR8	P08525	94 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	MRPL24	P36525	258 aa	Predicted RBP	3.37	□□□□□ -1.87
SUP35	YDR172W	CRC1	Q12289	327 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	YPL229W	Q99395	206 aa		3.37	□□□□□ -1.87
SUP35	YDR172W	COX14	P39103	70 aa		3.36	□□□□□ -1.87
SUP35	YDR172W	HAL1	Q01766	294 aa		3.36	□□□□□ -1.87
SUP35	YDR172W	ERI1	P62651	68 aa	Known RBP	3.35	□□□□□ -1.87
SUP35	YDR172W	YER175W-A	Q8TGU4	54 aa		3.35	□□□□□ -1.87
SUP35	YDR172W	YER039C-A	P0CD97	72 aa		3.35	□□□□□ -1.87
SUP35	YDR172W	YBR121C-A	P0C5L4	52 aa		3.34	□□□□□ -1.87
SUP35	YDR172W	CWP2	P43497	92 aa		3.34	□□□□□ -1.87
SUP35	YDR172W	YAL065C	O13511	128 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.88	not detected
SUP35	YDR172W	DSE2	P38844	325 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	YAR029W	P39549	74 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	YIA6	P40556	373 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	YMR320W	Q04897	101 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	HPA2	Q06592	156 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	YOR034C-A	Q3E735	80 aa		3.34	□□□□□ -1.88
SUP35	YDR172W	AUA1	P32450	94 aa		3.33	□□□□□ -1.88
SUP35	YDR172W	RPR2	P40571	144 aa		3.33	□□□□□ -1.88
SUP35	YDR172W	OST2	P46964	130 aa		3.33	□□□□□ -1.88
SUP35	YDR172W	YLL006W-A	Q3E814	58 aa		3.33	□□□□□ -1.88
SUP35	YDR172W	ENV10	Q99382	181 aa		3.33	□□□□□ -1.88
SUP35	YDR172W	RPS28B	P0C0X0	67 aa	Known RBP	3.32	□□□□□ -1.88
SUP35	YDR172W	RGM1	Q00453	211 aa		3.32	□□□□□ -1.88
SUP35	YDR172W	PPT2	Q12036	173 aa		3.32	□□□□□ -1.88
SUP35	YDR172W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.32	□□□□□ -1.88
SUP35	YDR172W	RPL33A	P05744	107 aa	Known RBP	3.32	□□□□□ -1.88
SUP35	YDR172W	COX10	P21592	462 aa		3.32	□□□□□ -1.88
SUP35	YDR172W	YBL081W	P38180	368 aa	Known RBP	3.32	□□□□□ -1.88
SUP35	YDR172W	RPL33B	P41056	107 aa	Known RBP	3.32	□□□□□ -1.88
SUP35	YDR172W	RPA12	P32529	125 aa	Known RBP	3.31	□□□□□ -1.88
SUP35	YDR172W	ATX1	P38636	73 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	YGR039W	P53225	103 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	YPR010C-A	A5Z2X5	72 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	YAL064W	P39711	94 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	SPC1	P46965	94 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	ABF2	Q02486	183 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	RRT15	Q3E811	62 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	YLL066W-B	Q8TGJ7	56 aa		3.31	□□□□□ -1.88
SUP35	YDR172W	RPC10	P40422	70 aa		3.3	□□□□□ -1.88
SUP35	YDR172W	HUR1	P45820	110 aa		3.3	□□□□□ -1.88
SUP35	YDR172W	YDR115W	Q04598	105 aa		3.3	□□□□□ -1.88
SUP35	YDR172W	SVP26	P38869	228 aa		3.29	□□□□□ -1.88
SUP35	YDR172W	YMR175W-A	Q3E766	64 aa		3.29	□□□□□ -1.88
SUP35	YDR172W	SMD1	Q02260	146 aa	Predicted RBP	3.29	□□□□□ -1.88
SUP35	YDR172W	PBA1	Q05778	276 aa		3.28	□□□□□ -1.88
SUP35	YDR172W	YKL183C-A	Q3E765	70 aa		3.28	□□□□□ -1.88
SUP35	YDR172W	YOR020W-A	Q3E824	90 aa		3.28	□□□□□ -1.88
SUP35	YDR172W	AIM19	P40502	157 aa		3.28	□□□□□ -1.89
SUP35	YDR172W	KNH1	P50112	268 aa		3.28	□□□□□ -1.89
SUP35	YDR172W	IRC21	Q04772	201 aa		3.28	□□□□□ -1.89
SUP35	YDR172W	MVB12	P42939	101 aa		3.27	□□□□□ -1.89
SUP35	YDR172W	YDL241W	Q07738	123 aa		3.27	□□□□□ -1.89
SUP35	YDR172W	RTC6	O14464	93 aa		3.26	□□□□□ -1.89
SUP35	YDR172W	YDR029W	Q12111	104 aa		3.26	□□□□□ -1.89
SUP35	YDR172W	YLR236C	A0A023PZG4	107 aa		3.25	□□□□□ -1.89
SUP35	YDR172W	AQY2	P0CD90	149 aa		3.25	□□□□□ -1.89
SUP35	YDR172W	MSA2	P36157	363 aa		3.25	□□□□□ -1.89
SUP35	YDR172W	PBI2	P0CT04	75 aa	Known RBP	3.24	□□□□□ -1.89
SUP35	YDR172W	MPC3	P53311	146 aa		3.24	□□□□□ -1.89
SUP35	YDR172W	ICY1	Q04329	127 aa		3.24	□□□□□ -1.89
SUP35	YDR172W	RPL29	P05747	59 aa	Predicted RBP	3.24	□□□□□ -1.89
SUP35	YDR172W	RAD6	P06104	172 aa		3.24	□□□□□ -1.89
SUP35	YDR172W	IGD1	P43598	195 aa		3.24	□□□□□ -1.89
SUP35	YDR172W	KRE1	P17260	313 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	YFL019C	P43576	117 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	SBH1	P52870	82 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	YAL063C-A	Q3E791	96 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	YAR023C	D6VPM8	179 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	ECM12	O13529	151 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	YDR381C-A	Q3E6R5	114 aa		3.23	□□□□□ -1.89
SUP35	YDR172W	YBL039W-B	P0C268	59 aa		3.22	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms